pancan_sampTypeMap {BiocOncoTK} | R Documentation

## helper for interpreting pancan-atlas sample type codes

### Description

helper for interpreting pancan-atlas sample type codes

### Usage

    pancan_sampTypeMap

### Format

data.frame

### Note

The sample type codes are not straightforward to interpret. Primary solid tumor is denoted "TP", and metastatic samples are denoted "TM". This data frame pairs code and natural language terms.

### Source

ISB BigQuery pancan-atlas project

### Examples

    BiocOncoTK::pancan_sampTypeMap

[Package BiocOncoTK version 1.5.1 Index]