026d8691b2b8e4d31ee13bb5d574db55 *DESCRIPTION
91d413d5150ec06f174978545498270d *INDEX
fc7fc6eaa037859ee3acc1349e3e837b *Meta/Rd.rds
dcf92e678c5d13850a29a1d57052debd *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
9388067c19bceaaa42b208aa40253b8c *Meta/hsearch.rds
8b500a0f43e18825ce6c056f155ef113 *Meta/links.rds
f5d5bd19fe47c94a226ac731cb04b8f8 *Meta/nsInfo.rds
8aaf34ae3e993aa7c3ef444dc8a4dde8 *Meta/package.rds
15b14bb8534e811e53b627f313eed7db *Meta/vignette.rds
ae59b8a6e95d660b2b63a851c68911a9 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/Basic4Cseq
409719ab32fac8ee2e5b2acc30611c13 *R/Basic4Cseq.rdb
eb57bcb295693c1e8b74ebaa07a33990 *R/Basic4Cseq.rdx
371a0994c3f3c2931aed600ac0183fde *data/liverData.RData
ba5c985bdae524e41b9b8a24d0cebb38 *data/liverDataRaw.RData
cb12cab230a19f7373dab080cd9dfade *doc/index.html
0cded5c665295c5748d19bad3ffdd592 *doc/vignette.R
67392a702c2453b846903e0c1a42e6c0 *doc/vignette.Rnw
16082acbc8dada0f6a42e4a1fc030242 *doc/vignette.pdf
b90cc5bc0dca1138debae1179cb813f8 *extdata/RCircos_GRCm38_ideogram.csv
6cbaecaf4ed2293298343bfce751c258 *extdata/RCircos_HG19_ideogram.csv
00c1d1d92fa3a07f3403a5c039f899c7 *extdata/enzymeData.csv
6332710cc1a1ee8ef40cb95538a94929 *extdata/fetalLiverCutter.sam
4f671ebe3f1c6dc00177f7d50b8944df *extdata/fetalLiverShort.bam
614b15a01e9f8d0bd62458ec969845c7 *extdata/fetalLiverVP.bed
ab13942a15e17712f182b3b1c1e0363a *extdata/fetalLiver_finalFragments.csv
a3e529247e47214266dd2a252dfb039b *extdata/transInteractionData.txt
d39a2c0c80702059da9c6f99ae18a212 *extdata/veryShortExample.fastq
a80e603e40f7343b0bb97c1380df61c8 *extdata/veryShortLib.csv
e9e6b8add27c84f481a1839f9db793d1 *extdata/veryShortReference.fasta
ac34dfc4f22e37a2a286f31ddf7ecceb *extdata/veryShortReference.fasta.amb
06d4a319a43ef8e7bf7f0090e14e6433 *extdata/veryShortReference.fasta.ann
88c3629f9b4134224e100e04d1fcc251 *extdata/veryShortReference.fasta.bwt
cfc9149681143ca9aff12fe0842e34d1 *extdata/veryShortReference.fasta.pac
3748a2acac76bf91845f10bd7df8dabb *extdata/veryShortReference.fasta.sa
e914f0f7d046dc7494eeb2e2d3348ed2 *extdata/vfl_aagctt_catg_mm9_54_vp.csv
cb8113f292b6668dd86d61425d18203a *help/AnIndex
409eab17c97e13c9fecea4fb77083f6f *help/Basic4Cseq.rdb
9352fb514dda6a0f0ce90d76e9eca49f *help/Basic4Cseq.rdx
01590caca2169f36d500c6c1396cf999 *help/aliases.rds
2d35e29569e755cbdc30e01c4035c397 *help/paths.rds
783c022cd82386a2bf96174c151136a0 *html/00Index.html
2c412d1358bc08182d151fb01de3a2cc *html/Data4Cseq-class.html
a671a4843ab228b29ea1dfd1210148eb *html/Data4Cseq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a98328cd3571007db27fede63dfae94a *html/checkRestrictionEnzymeSequence.html
c20e675b746a30661dba532f75d4061e *html/chooseNearCisFragments.html
69855337d33fe2bb95b4144102a12140 *html/createVirtualFragmentLibrary.html
5ffc281d52b00552d7699e2966366590 *html/drawDigestionFragmentHistogram.html
a1f56f6cac46ef3ba51820b6887f8da8 *html/drawHeatmap.html
7f50ca828f22aa7e207f7be604a46d2e *html/exportVisualizationFragmentData.html
8118534943020207c50138ad99cbfd3a *html/getReadDistribution.html
eb74cb590f499415472913ae188e7792 *html/giveEnzymeSequence.html
860ae8e01560a1cfed2d106d83b16582 *html/importVisualizationFragmentData.html
de159ddf59a9ee42ea4e6f2d51d130f9 *html/liverData.html
fe4638c07fb1ea36803a14a377022762 *html/liverDataRaw.html
7a02ff101aabc85093c7567a7392061a *html/normalizeFragmentData.html
49aeba29fdf92bd4a74cd5c62f386feb *html/plotTransInteractions.html
50f67f6752da9c8d112cbeee1bcfea8c *html/prepare4CseqData.html
3ef8f3337dc8ad4b1678dc625d57b1ee *html/printBEDFragmentLibrary.html
4f130a8d491b53eac9e794f1402eb144 *html/printWigFile.html
67c7b6932f861feba2b58ee18efbb07a *html/readPointsOfInterestFile.html
244cb5d628018b110e317d14142adb45 *html/readsToFragments.html
5a36df335f0a3152a677dc33d42cd278 *html/simulateDigestion.html
cf8418a6a2f5afd431e08fb8377c963d *html/visualizeViewpoint.html
