1a02449ad8f9db5f0c5887d65216d19a *DESCRIPTION
deb88c9870e02e8efb676b6178e53f99 *INDEX
79e09309f9ac6e723e9b0d0848e8e3d1 *LICENSE
00b6a0338b2af487a14205c390554860 *Meta/Rd.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
b922eef824bf2bc10a331e8e3dd9c150 *Meta/hsearch.rds
c882a6eee57f6280028ddc85c90c75b8 *Meta/links.rds
87add1c457d498c67fc7b08b90d60da2 *Meta/nsInfo.rds
49a992cccb00094f35b7b017731fc273 *Meta/package.rds
eb1fe24ee8014da7b41cb817721f2591 *Meta/vignette.rds
310d1eb8cae3467bbd5d17637d0f93fd *NAMESPACE
ffc9ef9a5a7ec26951bbee1d6e433f11 *NEWS.md
ebf0fc819595d631b8bf280c4b049940 *R/BUSpaRse
a2166600548c6b748c66af763786f040 *R/BUSpaRse.rdb
81f6f29eee2e1bab9f546f5151c89595 *R/BUSpaRse.rdx
6eb1752a19dd90819b4b9ce1e6a7b703 *doc/index.html
856237b25353aee7ebf3c945f202bb3b *doc/sparse-matrix.R
e495d4bf7bde9599110b27fb22b29993 *doc/sparse-matrix.Rmd
136d96b574443a638d7bbed132fdebbe *doc/sparse-matrix.html
2299f1056ff39d7bf85a9d805594f91f *doc/tr2g.R
22256c6a616342f370ab9071e1bb39f2 *doc/tr2g.Rmd
2393be5bb17509fa26879b02445ce03a *doc/tr2g.html
0761c33be39da1b2775611d586364fdd *help/AnIndex
7178020c0bbdc2d61164c292d52d84d6 *help/BUSpaRse.rdb
7a6a3b7938bd5a9fd3dd1c0be3c3b4f0 *help/BUSpaRse.rdx
290768d55b641ffff05dae9975794e4a *help/aliases.rds
6ab0bfc8780491236772f56c3693bdc5 *help/paths.rds
e28e2d1e0807df5f7fe82e579d3de6f1 *html/00Index.html
c583f4737dcfb376b925e3a9b80c3041 *html/EC2gene.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a41ff7bae7dd462ceb2e77227cb0cfb4 *html/annot_circular.html
8e4a95bfd2ecc91be9f22cdc01c84eec *html/check_char1.html
eeddd0dcb2b36fbfc8dba8e4426d03d1 *html/check_genome.html
bc3cad1abd5948ebf2b231bfcb528ea3 *html/check_gff.html
f1a2bac6b1a571d7f479a581a3065f85 *html/check_tag_present.html
94450d9a072867c754cfa2f4c5abc9fc *html/check_tx.html
acafb9b3edbff7f29e928061c9cd2549 *html/dot-get_velocity_files.html
a6828438ee2b0a8bd2da4436ee45ba3f *html/get_intron_flanks.html
1a6cfb739734c06de6a17e14b20afc88 *html/get_velocity_files.html
176ae11a7412046798545050a9a45dee *html/make_sparse_matrix.html
9d0d9c4fa0ab550b65f034bbc9a01808 *html/match_style.html
d0a9c4d345fd707f5dbe438b5844546b *html/read_count_output.html
c534d0f05371f4e8fce56e4431e9e932 *html/read_velocity_output.html
c7a8a9b4eef7b2b61e818fbe8e88518b *html/save_tr2g_bustools.html
5520f51a0d95662656487481a49419d1 *html/sort_tr2g.html
853196566204f0df8a5fd6529d58620d *html/species2dataset.html
052c817ff08739b094f82b7125092feb *html/standardize_tags.html
90977e1ed2fe90da74fa73f30638d137 *html/sub_annot.html
3a72ffdcd84cb951c613863788919e8b *html/subset_annot.html
7eea1bb573e8094fd712a8400f1d63da *html/tr2g_EnsDb.html
16f057a72fa1c2dd9a4d004498a1ee0a *html/tr2g_GRanges.html
d3b89b0ed5cd83f4917094637e7e80c7 *html/tr2g_TxDb.html
5d08325cdf04261f87bc70aff7e5210c *html/tr2g_ensembl.html
3d327cdc3339461e894ee280637c12fd *html/tr2g_fasta.html
051593badbf89212e1c89d16f4e1bd83 *html/tr2g_gff3.html
5125f052783d479c0dca823f4fdc67b0 *html/tr2g_gtf.html
a7154b7827f166a8bd848cf223760400 *html/tr2g_junction.html
ae18fe4dba2b0974934e23f8dd4375a0 *html/transcript2gene.html
29ed497c8f8f6ae751a4cdbe07431d3f *html/validate_velocity_input.html
a9d71f2c6d8a7fc0bffe6d15cc0ef817 *html/write_velocity_output.html
b94fa4209a5a9019bae1e93b251ccbe6 *libs/i386/BUSpaRse.dll
b1fe4e72fd2df132ad6743f0e5200cfe *libs/x64/BUSpaRse.dll
8cdd49a3d00a107a20d9d7d4c262081e *testdata/fa_tr2g_dm.csv
f2a00699a5dccf36b6cf2c57cab90266 *testdata/fa_tr2g_expected.csv
e9570ac22e1b1135442a0c547675940a *testdata/fa_tr2g_no_version.csv
3cda752fd01f178fdfb719ce3419a299 *testdata/fasta_dm_test.fasta
cb75d4a86d6c88a89bab04c3ad67fbe2 *testdata/fasta_test.fasta
a14c2c25c35d1dad0d5d2a19f20bc340 *testdata/genes.barcodes.txt
0b04955c05bafb91b663c5026fbad55a *testdata/genes.genes.txt
29bf3649da5ea0feea29b6a0431d8e15 *testdata/genes.mtx
4e8d444db919271da60d87f5036b8f59 *testdata/gff3_test.gff3
e41c1a05342ec643c72edf4f1a9f9fd0 *testdata/gtf_test.gtf
fa00ba8fd62460c031f1e0dd21528785 *testdata/junction_capture.txt
b76cdc26a4b29485c28e240bc241845d *testdata/junction_coll.fa
810a15dfde06ec3c41d5d8c1c342a2bf *testdata/junction_tr2g.tsv
151c0092bebd4c4438f64cdc37eb4822 *testdata/junction_tr2g_coll.tsv
108c93e40693441b9efd1754142b0985 *testdata/junctions.fa
ab63ee1730118176a5dd628c662e398a *testdata/matrix.ec
7f7f88a1b751d9548a270911b9dff735 *testdata/output.sorted.txt
3d716b39956e254b09b187641a138b7b *testdata/toy_example.RData
38ed617bcc12035a117bf23cf163ed8e *testdata/tr2g_bustools.tsv
f8914e453ea66a4a00428875e50c6295 *testdata/tr2g_expected.csv
3a36dbd9c75d7c2b288bc6c9f268a909 *testdata/tr2g_expected_version.csv
9a65a78b659e8c40f9b146d00e77446f *testdata/transcripts.txt
f446efe40fce03c1ff3b5fdf6209d4c8 *testdata/velocity_annot.gtf
972d9fcc38f1d010e77e460e66f6976c *testdata/velocity_cdna_tx.txt
a3bdc29820453f0034e3785b0f514cc6 *testdata/velocity_genome.fa
ef67546dc7bf19e88991f4c2828e948a *testdata/velocity_introns.fa
a13d971175ead68878ff1ff7adcaa11e *testdata/velocity_introns_capture.txt
5fbc8194be28610101c112ac4f3b8f7a *testdata/velocity_introns_coll.fa
43e683c86ab632843b4a22abf2f864b9 *testdata/velocity_introns_coll_capture.txt
7caaef3bc82afbefe132f1f68f87205b *testdata/velocity_tr2g.tsv
ca3b7bfb5d62dbfa4d723b9f65695ca0 *testdata/velocity_tr2g_coll.tsv
14d9d74e8fe09e5aa96f05a31943ffc2 *testdata/velocity_tx.fa
