ex.corrected.data {BEclear} | R Documentation

## Example matrix of corrected data for the BEclear-package

### Description

Example matrix containing a already batch effect corrected sample matrix of beta values from breast invasive carcinoma TCGA methylation data.[1] The matrix contains a small amount of predicted beta values outside of the boundaries to show the operating principles of some of the methods from the BEclear package.

### Usage

    data(BEclearCorrected)

### Format

A matrix containing already corrected beta values of some samples from the breast invasive carcinoma TCGA methylation data. The colnames denote samples, rownames denote gene names.

### References

Cancer Genome Atlas Research Network, Weinstein JN, Collisson EA, Mills GB, Shaw KRM, Ozenberger BA, Ellrott K, Shmulevich I, Sander C, Stuart JM (2013). “The Cancer Genome Atlas Pan-Cancer analysis project.” Nature genetics, 45(10), 1113–20. ISSN 1546-1718, doi: 10.1038/ng.2764, http://www.ncbi.nlm.nih.gov/pubmed/24071849 http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3919969.

[Package BEclear version 2.2.0 Index]