mvaBASIC {AgiMicroRna} | R Documentation

## MVA plot

### Description

For each array, the M value is computed for every spot as the difference between the spot intensity in the array and the averaged intensity for that feature over the whole set of arrays. It does not make a distintion between the different kind of features in the array as the mvaMicroRna() does.

### Usage

    mvaBASIC(object, colorfill, maintitle)

### Arguments

`object` | An expression matrix in log2 scale
`colorfill` | color of the plot
`maintitle` | title of the plot

### Author(s)

Pedro Lopez-Romero

### Examples

    	data(dd.micro)
    	op=par(mfrow=c(1,1),ask=TRUE)
    	mvaBASIC(log2(dd.micro$meanS),
    	colorfill="red",
            maintitle=" log2 Mean Signal")
    	par(op)

[Package AgiMicroRna version 2.36.0 Index]