AMARETTO_Preprocess {AMARETTO} | R Documentation

## AMARETTO_Preprocess

### Description

Wrapper code that analyzes process TCGA GISTIC (CNV) and gene expression (rna-seq or microarray) data via one call

### Usage

    AMARETTO_Preprocess(DataSetDirectories = DataSetDirectories,
      BatchData = BatchData)

### Arguments

`DataSetDirectories` | DataSetDirectories
`BatchData` | BatchData

### Value

result

### Examples

    ## Not run:
    TargetDirectory <-  "Downloads"  # path to data download directory
    CancerSite <- 'CHOL'
    DataSetDirectories <- AMARETTO_Download(CancerSite,TargetDirectory)
    ProcessedData <- AMARETTO_Preprocess(DataSetDirectories,BatchData)

    ## End(Not run)

[Package AMARETTO version 1.2.0 Index]