AMARETTO_Run {AMARETTO} | R Documentation

## AMARETTO_Run Function to run AMARETTO, a statistical algorithm to identify cancer drivers by integrating a variety of omics data from cancer and normal tissue.

### Description

AMARETTO_Run Function to run AMARETTO, a statistical algorithm to identify cancer drivers by integrating a variety of omics data from cancer and normal tissue.

### Usage

    AMARETTO_Run(AMARETTOinit)

### Arguments

`AMARETTOinit` | List output from AMARETTO_Initialize().

### Value

result

### Examples

    data('ProcessedDataLIHC')
    AMARETTOinit <- AMARETTO_Initialize(ProcessedData = ProcessedDataLIHC,
                                        NrModules = 2, VarPercentage = 50)
    AMARETTOresults <- AMARETTO_Run(AMARETTOinit)

[Package AMARETTO version 1.2.0 Index]