Codelink Human Whole Genome Bioarray (~55 000 human genes) annotation data (chip hwgcod)

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Documentation for package ‘hwgcod.db’ version 3.0.0

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hwgcod Bioconductor annotation data package
hwgcod.db Bioconductor annotation data package
hwgcodACCNUM Map Manufacturer identifiers to Accession Numbers
hwgcodALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hwgcodCHR Map Manufacturer IDs to Chromosomes
hwgcodCHRLENGTHS A named vector for the length of each of the chromosomes
hwgcodCHRLOC Map Manufacturer IDs to Chromosomal Location
hwgcodCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hwgcodENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hwgcodENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hwgcodENTREZID Map between Manufacturer Identifiers and Entrez Gene
hwgcodENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hwgcodENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hwgcodGENENAME Map between Manufacturer IDs and Genes
hwgcodGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
hwgcodGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
hwgcodGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
hwgcodLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hwgcodMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hwgcodMAPCOUNTS Number of mapped keys for the maps in package hwgcod.db
hwgcodOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hwgcodORGANISM The Organism information for hwgcod
hwgcodORGPKG The Organism information for hwgcod
hwgcodPATH Mappings between probe identifiers and KEGG pathway identifiers
hwgcodPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
hwgcodPMID Maps between Manufacturer Identifiers and PubMed Identifiers
hwgcodPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
hwgcodREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hwgcodSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hwgcodUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hwgcodUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hwgcodUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hwgcod_dbconn Collect information about the package annotation DB
hwgcod_dbfile Collect information about the package annotation DB
hwgcod_dbInfo Collect information about the package annotation DB
hwgcod_dbschema Collect information about the package annotation DB