Package: topGO
Type: Package
Title: topGO: Enrichment analysis for Gene Ontology
Version: 2.6.0
Date: 2010-10-01
Author: Adrian Alexa, Jorg Rahnenfuhrer
Maintainer: Adrian Alexa <alexa@mpi-inf.mpg.de>
Description: topGO package provides tools for testing GO terms while accounting
             for the topology of the GO graph. Different test statistics and
	     different methods for eliminating local similarities and dependencies
             between GO terms can be implemented and applied.
License: LGPL
Depends: R (>= 2.10.0), methods, graph (>= 1.14.0), Biobase (>= 2.0.0),
        GO.db (>= 2.3.0), AnnotationDbi (>= 1.7.19), SparseM (>= 0.73)
Imports: methods, graph, Biobase, SparseM, AnnotationDbi, lattice
Suggests: ALL, hgu95av2.db, hgu133a.db, genefilter, xtable, multtest,
        Rgraphviz, globaltest
biocViews: Microarray,Bioinformatics,Visualization
Collate: AllClasses.R topGOmethods.R topGOgraph.R topGOalgo.R
        topGOfunctions.R topGOannotations.R topGOtests.R topGOviz.R
        zzz.R
Packaged: 2011-11-01 07:52:46 UTC; biocbuild
Built: R 2.14.0; ; 2011-11-01 12:57:37 UTC; windows
