Package: VanillaICE
Version: 1.16.1
Title: A Hidden Markov Model for high throughput genotyping arrays
Author: Robert Scharpf <rscharpf@jhsph.edu>, Kevin Scharpf, and  Ingo Ruczinski <ingo@jhsph.edu>
Maintainer: Robert Scharpf <rscharpf@jhsph.edu>
Depends: R (>= 2.13.0), IRanges, oligoClasses (>= 1.15.40), methods,
        stats
Imports: SNPchip (>= 1.15.0), stats, Biobase, lattice, utils, IRanges,
        grid
Suggests: crlmm (>= 1.11.55), genomewidesnp6Crlmm, hapmapsnp6,
        RColorBrewer, genefilter, RSQLite
Enhances: HapmapCrlmmAffySet, DNAcopy, crlmm
Description: Hidden Markov Models for characterizing chromosomal alterations in high throughput SNP arrays
License: LGPL-2
LazyLoad: yes
Collate: AllGenerics.R AllClasses.R methods-CopyNumberSet.R
        methods-oligoSnpSet.R methods-RangedDataHMM.R
        methods-HmmOptionList.R methods-CNSet.R methods-matrix.R
        methods-SnpSet.R functions.R utils.R zzz.R
biocViews: Bioinformatics, CopyNumberVariants, SNP, GeneticVariability,
        Visualization
Packaged: 2011-11-03 06:37:34 UTC; biocbuild
Built: R 2.14.0; i386-pc-mingw32; 2011-11-03 11:37:31 UTC; windows
Archs: i386, x64
