Package: SNPchip
Version: 1.18.1
Title: Classes and Methods for high throughput SNP chip data
Author: Robert Scharpf <rscharpf@jhsph.edu> and Ingo Ruczinski
Maintainer: Robert Scharpf <rscharpf@jhsph.edu>
Depends: R (>= 2.10.0), Biobase (>= 2.7.4), methods, oligoClasses (>=
        1.9.52), graphics
Imports: Biobase (>= 2.7.4), graphics, grDevices, methods, oligoClasses
        (>= 1.9.52), stats, utils
Suggests: RSQLite, VanillaICE, RColorBrewer, genefilter,
        pd.mapping50k.xba240
Description: This package defines classes and functions for plotting copy number and genotype in high throughput SNP platforms such as Affymetrix and Illumina.  In particular, SNPchip is a useful add-on to the oligo package for visualizing SNP-level estimates after pre-processing.
License: LGPL (>= 2)
LazyLoad: yes
Collate: AllClasses.R AllGenerics.R methods-ParESet.R
        initialize-methods.R methods-SnpSet.R
        methods-AnnotatedDataFrame.R methods-oligoSnpSet.R
        plotSnp-methods.R methods-list.R functions.R zzz.R
biocViews: CopyNumberVariants, SNP, GeneticVariability, Visualization
URL: http://www.biostat.jhsph.edu/~iruczins/software/snpchip.html
Packaged: 2011-11-17 07:24:32 UTC; biocbuild
Built: R 2.14.0; ; 2011-11-17 12:38:27 UTC; windows
