# Calculates Mulcom test

## Documentation for package ‘Mulcom’ version 1.4.0

- DESCRIPTION file.
- Overview of user guides and package vignettes; browse directory.
- Package NEWS.

## Help Pages

Affy | Affy Dataset
AffyIlmn | cross mapping table
class:MULCOM | Class MulCom
class:MULCOM_P | Class MulCom Permutation
harmonicMean | MulCom Harmonic Mean
Illumina | Illumina Dataset
Ilmn | Ilmn Dataset
limmaAffySymbols | significant gene list with limma in Affymetrix
limmaIlmnSymbols | significant gene list with limma in Illumina
mulCalc | MulCom Calculation
mulCAND | Identify the Mulcom candidate feature selection
MULCOM | Class MulCom
MULCOM-class | Class MulCom
mulcomGeneListIlmn | significant gene list with limma in Illumina
MULCOM_P | Class MulCom Permutation
MULCOM_P-class | Class MulCom Permutation
mulDELTA | MulCom Delta
mulDiff | MulCom Test Differential analysis
mulFSG | MulCom False Significant Genes
mulIndex | Mulcom Index for Monte Carlo Simlation
mulInt | generates a consensus matrix from list of genes
mulMSE | MulCom Mean Square Error
mulOpt | MulCom optimization
mulOptPars | MulCom Parameter Optimization
mulOptPlot | MulCom optimization Plot
mulParOpt | MulCom Parameters Optimization
mulPerm | MulCom Permutation
mulPermC | MulCom Permutation
mulScores | MulCom Score Calculation
mulSSE | MulCom Sum of Square Error
samAffySymbols | significant gene list with SAM in Affymetrix
samIlmnSymbols | significant gene list with SAM in Illumina
samOptPars | sam Parameter Optimization