Package: crlmm
Type: Package
Title: Genotype Calling (CRLMM) and Copy Number Analysis tool for
        Affymetrix SNP 5.0 and 6.0 and Illumina arrays.
Version: 1.10.0
Date: 2010-12-10
Author: Benilton S Carvalho <Benilton.Carvalho@cancer.org.uk>, Robert
        Scharpf <rscharpf@jhsph.edu>, Matt Ritchie
        <mritchie@wehi.edu.au>, Ingo Ruczinski <iruczins@jhsph.edu>,
        Rafael A Irizarry
Maintainer: Benilton S Carvalho <Benilton.Carvalho@cancer.org.uk>,
        Robert Scharpf <rscharpf@jhsph.edu>, Matt Ritchie
        <mritchie@wehi.EDU.AU>
Description: Faster implementation of CRLMM specific to SNP 5.0 and 6.0
        arrays, as well as a copy number tool specific to 5.0, 6.0, and
        Illumina platforms
License: Artistic-2.0
Depends: R (>= 2.13.0), methods, Biobase (>= 2.11.9), oligoClasses (>=
        1.13.22)
Imports: affyio (>= 1.19.2), ellipse, ff (>= 2.2-1), genefilter (>=
        1.33.0), mvtnorm, preprocessCore (>= 1.13.4), splines, stats,
        SNPchip, utils
Suggests: hapmapsnp6, genomewidesnp6Crlmm (>= 1.0.4), snpMatrix,
        ellipse, RUnit
Collate: AllGenerics.R AllClasses.R methods-AssayData.R methods-CNSet.R
        methods-CNSetLM.R methods-eSet.R methods-SnpSuperSet.R
        cnrma-functions.R crlmm-functions.R crlmmGT2.R crlmm-illumina.R
        snprma-functions.R plot-methods.R utils.R zzz.R
        test_crlmm_package.R
LazyLoad: yes
biocViews: Microarray, Preprocessing, SNP, Bioinformatics,
        CopyNumberVariants
Packaged: 2011-04-14 09:50:10 UTC; biocbuild
Built: R 2.13.0; i386-pc-mingw32; 2011-04-14 15:13:53 UTC; windows
Archs: i386, x64
