RPA-package             RPA: probabilistic analysis of probe
                        reliability and gene expression
RPA.iteration           Estimating model parameters d and sigma2.
RPA.pointestimate       Computing point estimate for the model
                        parameters for all probe sets.
RPA.preprocess          Preprocess AffyBatch object for RPA.
estimate.affinities     Probe affinity estimation
get.probe.noise.estimates
                        Fetch probe-level noise estimates from an rpa
                        object
plot.rpa                Plot RPA results and probe-level data for a
                        specific probeset.
rpa                     RPA for preprocessing.
rpa-class               Class "rpa"
rpa.fit                 rpa.fit
rpa.fit-class           Class "rpa.fit"
rpa.list-class          Class "rpa.list"
rpa.plot                Plot RPA results and probe-level data for a
                        specified probeset.
rpa.priors-class        Class "rpa.priors"
rpa2eset                Coerce 'rpa' object into an 'ExpressionSet'
set.priors              Set prior parameter object for RPA.
