hiv                     Microarray intensity expression levels for HIV
                        type 1 infection of CD4+
like                    Microarray intensity expression levels for
                        like-like data
neg.contr               Indicator of known truly non differentially
                        expressed genes in the hiv
norm1a                  Function for normalizing the mean of single
                        replicate log ratios
norm1b                  Function for normalizing the mean and variance
                        (or just the variance)
norm1c                  Function for normalizing the mean of
                        average-across-replicates log
norm1d                  Function for normalizing the mean and variance
                        of
norm2c                  Function for normalizing the mean of
                        average-across-replicates log
norm2d                  Function for normalizing the mean and variance
                        of
nudge1                  Function for normalizing data, fitting a
                        normal-uniform mixture and
nudge2                  Function for normalizing data, fitting a
                        normal-uniform mixture and
pos.contr               Indicator of known truly differentially
                        expressed genes in the hiv
