Vector objects for R with external storage


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Documentation for package ‘externalVector’ version 1.16.0

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A C D E F G I L M N O P R S V misc

-- A --

allIndex-class Class "allIndex", index class representing a subscript for all elements
allNA The generics "allNA" and "anyNA".
allNA-method Class "NAIndex", index class representing a subscript of all NA's for a
allNA-method Class "allIndex", index class representing a subscript for all elements
allNA-method The generics "allNA" and "anyNA".
allNA-method Class "indirectExternalMatrix", class for indirect matrix subset of an
allNA-method Class "indirectExternalVector", class for indirect vector subset of an
allNA-method Class "matrixIndex", index class representing a set of row and column
allNA-method Class "noneIndex", index class representing a subscript for none of the
allNA-method Class "positiveIndex", index class representing a sequence of
allNA-method Class "sliceIndex", index class representing a sequence of non-negative
allocate Generics associated with external resources and their allocators
allocate-method Class "externalAllocator", base class for memory allocators for
allocate-method Class "externalResource", base class for external resource allocated by
allocate-method Class "gcAllocator", memory allocator class for external resources
allocatedSize Generics associated with external resources and their allocators
allocatedSize-method Class "externalResource", base class for external resource allocated by
allocatedSize-method Class "nativeStorageMethods", class holding an external pointer to a C
allocatedSize-method Class "simpleStorage", an external storage class that uses reference to
allocatedType Generics associated with external resources and their allocators
allocatedType-method Class "externalResource", base class for external resource allocated by
allocatedType-method Class "simpleStorage", an external storage class that uses reference to
allocator Generics associated with external resources and their allocators
allocator-method Class "externalResource", base class for external resource allocated by
allocator-method Class "externalStorage", base class for external storage for objects of
allocator-method Class "nativeStorageMethods", class holding an external pointer to a C
anyNA The generics "allNA" and "anyNA".
anyNA-method Class "NAIndex", index class representing a subscript of all NA's for a
anyNA-method Class "allIndex", index class representing a subscript for all elements
anyNA-method The generics "allNA" and "anyNA".
anyNA-method Class "indirectExternalMatrix", class for indirect matrix subset of an
anyNA-method Class "indirectExternalVector", class for indirect vector subset of an
anyNA-method Class "matrixIndex", index class representing a set of row and column
anyNA-method Class "noneIndex", index class representing a subscript for none of the
anyNA-method Class "positiveIndex", index class representing a sequence of
anyNA-method Class "sliceIndex", index class representing a sequence of non-negative
apply-method Class "externalVector", base class for vector objects stored in an
Arith-method Class "NAIndex", index class representing a subscript of all NA's for a
Arith-method Class "allIndex", index class representing a subscript for all elements
Arith-method Class "externalVectorWithStorage", external vector class with an
Arith-method Class "indirectExternalMatrix", class for indirect matrix subset of an
Arith-method Class "indirectExternalVector", class for indirect vector subset of an
Arith-method Class "noneIndex", index class representing a subscript for none of the
Arith-method Class "positiveIndex", index class representing a sequence of
Arith-method Class "sliceIndex", index class representing a sequence of non-negative
Arith-method Class "vectorIndex", base class for index classes used to represent
as.character-method Class "externalVector", base class for vector objects stored in an
as.complex-method Class "externalVector", base class for vector objects stored in an
as.data.frame-method Class "externalVector", base class for vector objects stored in an
as.double-method Class "externalVector", base class for vector objects stored in an
as.integer-method Class "externalVector", base class for vector objects stored in an
as.integer-method Class "positiveIndex", index class representing a sequence of
as.list-method Class "externalVector", base class for vector objects stored in an
as.logical-method Class "externalVector", base class for vector objects stored in an
as.matrix-method Class "externalVector", base class for vector objects stored in an
as.matrix-method Class "indirectExternalMatrix", class for indirect matrix subset of an
as.matrix-method Class "indirectExternalVector", class for indirect vector subset of an
as.numeric-method Class "externalVector", base class for vector objects stored in an
as.Rmatrix convert an object to an R basic vector or matrix
as.Rmatrix-method convert an object to an R basic vector or matrix
as.Rvector convert an object to an R basic vector or matrix
as.Rvector-method convert an object to an R basic vector or matrix
as.Rvector-method Class "externalVector", base class for vector objects stored in an
as.Rvector-method Class "externalVectorWithStorage", external vector class with an
as.Rvector-method Class "indirectExternalMatrix", class for indirect matrix subset of an
as.Rvector-method Class "indirectExternalVector", class for indirect vector subset of an
as.single-method Class "externalVector", base class for vector objects stored in an
as.vector-method Class "externalVector", base class for vector objects stored in an
as.vector-method Class "indirectExternalMatrix", class for indirect matrix subset of an
as.vector-method Class "indirectExternalVector", class for indirect vector subset of an
asEach Coerce each element of an external vector to a particular type
asEach-method Coerce each element of an external vector to a particular type
asEach-method Class "externalVector", base class for vector objects stored in an
asEach-method Class "externalVectorWithStorage", external vector class with an

-- C --

c-method Class "externalVector", base class for vector objects stored in an
coerce-method Class "externalVector", base class for vector objects stored in an
coerce-method Class "indirectExternalMatrix", class for indirect matrix subset of an
coerce-method Class "indirectExternalVector", class for indirect vector subset of an
coerce-method Class "matrixIndex", index class representing a set of row and column
coerce-method Class "positiveIndex", index class representing a sequence of
coerce-method Class "sliceIndex", index class representing a sequence of non-negative
colMeans-method Class "externalVectorWithStorage", external vector class with an
colSums-method Class "externalVectorWithStorage", external vector class with an
Compare-method Class "externalVectorWithStorage", external vector class with an
Compare-method Class "indirectExternalMatrix", class for indirect matrix subset of an
Compare-method Class "indirectExternalVector", class for indirect vector subset of an
Complex-method Class "externalVectorWithStorage", external vector class with an
Complex-method Class "indirectExternalMatrix", class for indirect matrix subset of an
Complex-method Class "indirectExternalVector", class for indirect vector subset of an
cor Correlation, Variance and Covariance (Matrices)
cor-method Class "externalVector", base class for vector objects stored in an
cor-method Correlation, Variance and Covariance (Matrices)
cov Correlation, Variance and Covariance (Matrices)
cov-method Class "externalVector", base class for vector objects stored in an
cov-method Correlation, Variance and Covariance (Matrices)
cov2cor Correlation, Variance and Covariance (Matrices)
cov2cor-method Class "externalVector", base class for vector objects stored in an

-- D --

deallocate Generics associated with external resources and their allocators
deallocate-method Class "externalAllocator", base class for memory allocators for
deallocate-method Class "externalResource", base class for external resource allocated by
deallocate-method Class "gcAllocator", memory allocator class for external resources
defaultElement Return the default element for a vector object.
defaultElement-method Return the default element for a vector object.
defaultElement-method Class "externalVector", base class for vector objects stored in an
dim-method Class "externalVectorWithStorage", external vector class with an
dim-method Class "indirectExternalMatrix", class for indirect matrix subset of an
dim-method Class "indirectExternalVector", class for indirect vector subset of an
dim-method Class "matrixIndex", index class representing a set of row and column
dim<--method Class "NAIndex", index class representing a subscript of all NA's for a
dim<--method Class "allIndex", index class representing a subscript for all elements
dim<--method Class "externalVectorWithStorage", external vector class with an
dim<--method Class "indirectExternalMatrix", class for indirect matrix subset of an
dim<--method Class "indirectExternalVector", class for indirect vector subset of an
dim<--method Class "noneIndex", index class representing a subscript for none of the
dim<--method Class "positiveIndex", index class representing a sequence of
dim<--method Class "sliceIndex", index class representing a sequence of non-negative
dimnames-method Class "externalVectorWithStorage", external vector class with an
dimnames-method Class "indirectExternalMatrix", class for indirect matrix subset of an
dimnames-method Class "indirectExternalVector", class for indirect vector subset of an
dimnames-method Class "matrixIndex", index class representing a set of row and column
dimnames<--method Class "externalVector", base class for vector objects stored in an
dimnames<--method Class "indirectExternalMatrix", class for indirect matrix subset of an
dimnames<--method Class "indirectExternalVector", class for indirect vector subset of an

-- E --

exprMatrix-class Class union for objects behaving like a matrix
external.size Generics associated with external resources and their allocators
external.size-method Class "externalAllocator", base class for memory allocators for
external.size-method Class "externalResource", base class for external resource allocated by
external.size-method Class "gcAllocator", memory allocator class for external resources
external.size<- Generics associated with external resources and their allocators
external.size<--method Class "externalAllocator", base class for memory allocators for
external.size<--method Class "externalResource", base class for external resource allocated by
external.size<--method Class "gcAllocator", memory allocator class for external resources
externalAllocator-class Class "externalAllocator", base class for memory allocators for
externalCharacter Creating external vectors
externalComplex Creating external vectors
externalInteger Creating external vectors
externalList Creating external vectors
externalLogical Creating external vectors
externalMatrix Create an external matrix object
externalNumeric Creating external vectors
externalResource-class Class "externalResource", base class for external resource allocated by
externalStorage-class Class "externalStorage", base class for external storage for objects of
externalVector Creating external vectors
externalVector-class Class "externalVector", base class for vector objects stored in an
externalVectorWithStorage-class Class "externalVectorWithStorage", external vector class with an

-- F --

force-method Class "indirectExternalMatrix", class for indirect matrix subset of an
force-method Class "indirectExternalVector", class for indirect vector subset of an

-- G --

gcAllocator-class Class "gcAllocator", memory allocator class for external resources
getExternalStorage Extract external storage
getExternalStorage-method Class "externalVectorWithStorage", external vector class with an
getExternalStorage-method Class "indirectExternalMatrix", class for indirect matrix subset of an
getExternalStorage-method Class "indirectExternalVector", class for indirect vector subset of an
getNativeStorageMethods Return the storage methods associated with an object
getNativeStorageMethods-method Class "externalStorage", base class for external storage for objects of
getNativeStorageMethods-method Class "externalVectorWithStorage", external vector class with an
getNativeStorageMethods-method Return the storage methods associated with an object
getPointer Generics associated with external resources and their allocators
getPointer-method Class "externalResource", base class for external resource allocated by
getPointer-method Class "externalStorage", base class for external storage for objects of
getPointer-method Class "nativeStorageMethods", class holding an external pointer to a C

-- I --

indirectExternalMatrix-class Class "indirectExternalMatrix", class for indirect matrix subset of an
indirectExternalVector-class Class "indirectExternalVector", class for indirect vector subset of an
initialize-method Class "NAIndex", index class representing a subscript of all NA's for a
initialize-method Class "allIndex", index class representing a subscript for all elements
initialize-method Class "externalResource", base class for external resource allocated by
initialize-method Class "externalStorage", base class for external storage for objects of
initialize-method Class "externalVectorWithStorage", external vector class with an
initialize-method Class "nativeStorageMethodsList", contains objects from class
initialize-method Class "noneIndex", index class representing a subscript for none of the
initialize-method Class "positiveIndex", index class representing a sequence of
initializeResource Generics associated with external resources and their allocators
initializeResource-method Class "externalResource", base class for external resource allocated by
initializeResource-method Class "externalStorage", base class for external storage for objects of
initializeResource-method Class "nativeStorageMethods", class holding an external pointer to a C
integerOrNull-class Some useful class unions
internalType Get a vector object similar to the one stored inside an external
internalType-method Class "externalStorage", base class for external storage for objects of
is.finite-method Class "externalVectorWithStorage", external vector class with an
is.finite-method Class "indirectExternalMatrix", class for indirect matrix subset of an
is.finite-method Class "indirectExternalVector", class for indirect vector subset of an
is.infinite-method Class "externalVectorWithStorage", external vector class with an
is.infinite-method Class "indirectExternalMatrix", class for indirect matrix subset of an
is.infinite-method Class "indirectExternalVector", class for indirect vector subset of an
is.na-method Class "externalVectorWithStorage", external vector class with an
is.na-method Class "indirectExternalMatrix", class for indirect matrix subset of an
is.na-method Class "indirectExternalVector", class for indirect vector subset of an
is.nan-method Class "externalVectorWithStorage", external vector class with an
is.nan-method Class "indirectExternalMatrix", class for indirect matrix subset of an
is.nan-method Class "indirectExternalVector", class for indirect vector subset of an

-- L --

lapply-method Class "externalVector", base class for vector objects stored in an
lapply-method Class "externalVectorWithStorage", external vector class with an
length-method Class "NAIndex", index class representing a subscript of all NA's for a
length-method Class "allIndex", index class representing a subscript for all elements
length-method Class "externalVectorWithStorage", external vector class with an
length-method Class "indirectExternalMatrix", class for indirect matrix subset of an
length-method Class "indirectExternalVector", class for indirect vector subset of an
length-method Class "matrixIndex", index class representing a set of row and column
length-method Class "noneIndex", index class representing a subscript for none of the
length-method Class "sliceIndex", index class representing a sequence of non-negative
length<--method Class "NAIndex", index class representing a subscript of all NA's for a
length<--method Class "allIndex", index class representing a subscript for all elements
length<--method Class "externalVectorWithStorage", external vector class with an
length<--method Class "indirectExternalMatrix", class for indirect matrix subset of an
length<--method Class "indirectExternalVector", class for indirect vector subset of an
length<--method Class "noneIndex", index class representing a subscript for none of the
length<--method Class "sliceIndex", index class representing a sequence of non-negative
listOrNull-class Some useful class unions
log-method Class "externalVectorWithStorage", external vector class with an
log-method Class "indirectExternalMatrix", class for indirect matrix subset of an
log-method Class "indirectExternalVector", class for indirect vector subset of an

-- M --

makeSlice Create a new object of class "sliceIndex"
match-method Class "externalVectorWithStorage", external vector class with an
Math-method Class "externalVectorWithStorage", external vector class with an
Math-method Class "indirectExternalMatrix", class for indirect matrix subset of an
Math-method Class "indirectExternalVector", class for indirect vector subset of an
matrixIndex-class Class "matrixIndex", index class representing a set of row and column
mean-method Class "externalVector", base class for vector objects stored in an
median-method Class "externalVector", base class for vector objects stored in an

-- N --

NAIndex-class Class "NAIndex", index class representing a subscript of all NA's for a
names-method Class "NAIndex", index class representing a subscript of all NA's for a
names-method Class "externalVectorWithStorage", external vector class with an
names-method Class "indirectExternalMatrix", class for indirect matrix subset of an
names-method Class "indirectExternalVector", class for indirect vector subset of an
names-method Class "matrixIndex", index class representing a set of row and column
names-method Class "sliceIndex", index class representing a sequence of non-negative
names<--method Class "NAIndex", index class representing a subscript of all NA's for a
names<--method Class "externalVector", base class for vector objects stored in an
names<--method Class "externalVectorWithStorage", external vector class with an
names<--method Class "indirectExternalMatrix", class for indirect matrix subset of an
names<--method Class "indirectExternalVector", class for indirect vector subset of an
names<--method Class "sliceIndex", index class representing a sequence of non-negative
nativeStorageMethods-class Class "nativeStorageMethods", class holding an external pointer to a C
nativeStorageMethodsList-class Class "nativeStorageMethodsList", contains objects from class
noneIndex-class Class "noneIndex", index class representing a subscript for none of the
nonSlotAttributes Functions to extract and set attributes which are not slots.
nonSlotAttributes<- Functions to extract and set attributes which are not slots.

-- O --

Ops-method Class "externalVectorWithStorage", external vector class with an
Ops-method Class "indirectExternalMatrix", class for indirect matrix subset of an
Ops-method Class "indirectExternalVector", class for indirect vector subset of an

-- P --

positiveIndex-class Class "positiveIndex", index class representing a sequence of

-- R --

rebind Allocate a new external vector with external storage
rebind-method Class "externalVectorWithStorage", external vector class with an
reinitializePointer Generics associated with external resources and their allocators
reinitializePointer-method Class "externalAllocator", base class for memory allocators for
reinitializePointer-method Class "externalResource", base class for external resource allocated by
reinitializePointer-method Class "gcAllocator", memory allocator class for external resources
rowMeans-method Class "externalVectorWithStorage", external vector class with an
rowSums-method Class "externalVectorWithStorage", external vector class with an

-- S --

sapply-method Class "externalVector", base class for vector objects stored in an
setDimNames Set names and dimnames
setDimNames-method Class "externalVector", base class for vector objects stored in an
setDimNames-method Class "externalVectorWithStorage", external vector class with an
setDimNames-method Class "matrixIndex", index class representing a set of row and column
setExternalStorageClass Create subclass of externalStorage
setNames Set names and dimnames
setNames-method Class "externalVector", base class for vector objects stored in an
setNames-method Class "externalVectorWithStorage", external vector class with an
setNames-method Class "indirectExternalVector", class for indirect vector subset of an
setNames-method Class "matrixIndex", index class representing a set of row and column
setVirtualMethod Set a virtual method for a given signature
show-method Class "externalVector", base class for vector objects stored in an
simpleStorage-class Class "simpleStorage", an external storage class that uses reference to
sliceIndex-class Class "sliceIndex", index class representing a sequence of non-negative
SubscriptList Function to convert a list of array subscripts to a list objects of
Subset Generics Subset and Subset2 in package 'externalVector' and their
Subset-method Generics Subset and Subset2 in package 'externalVector' and their
Subset-methods Generics Subset and Subset2 in package 'externalVector' and their
Subset2 Generics Subset and Subset2 in package 'externalVector' and their
Subset2-method Generics Subset and Subset2 in package 'externalVector' and their
Subset2-methods Generics Subset and Subset2 in package 'externalVector' and their
Summary-method Class "externalVectorWithStorage", external vector class with an
Summary-method Class "indirectExternalMatrix", class for indirect matrix subset of an
Summary-method Class "indirectExternalVector", class for indirect vector subset of an

-- V --

var Correlation, Variance and Covariance (Matrices)
var-method Class "externalVector", base class for vector objects stored in an
var-method Correlation, Variance and Covariance (Matrices)
vectorIndex-class Class "vectorIndex", base class for index classes used to represent
vectorNamesType-class Some useful class unions

-- misc --

[-method Class "NAIndex", index class representing a subscript of all NA's for a
[-method Class "allIndex", index class representing a subscript for all elements
[-method Class "externalVectorWithStorage", external vector class with an
[-method Class "indirectExternalMatrix", class for indirect matrix subset of an
[-method Class "indirectExternalVector", class for indirect vector subset of an
[-method Class "matrixIndex", index class representing a set of row and column
[-method Class "noneIndex", index class representing a subscript for none of the
[-method Class "positiveIndex", index class representing a sequence of
[-method Class "sliceIndex", index class representing a sequence of non-negative
[<--method Class "NAIndex", index class representing a subscript of all NA's for a
[<--method Class "allIndex", index class representing a subscript for all elements
[<--method Class "externalVectorWithStorage", external vector class with an
[<--method Class "indirectExternalMatrix", class for indirect matrix subset of an
[<--method Class "indirectExternalVector", class for indirect vector subset of an
[<--method Class "noneIndex", index class representing a subscript for none of the
[[-method Class "matrixIndex", index class representing a set of row and column
[[<--method Class "NAIndex", index class representing a subscript of all NA's for a
[[<--method Class "allIndex", index class representing a subscript for all elements
[[<--method Class "noneIndex", index class representing a subscript for none of the