DOLite                  Disease Ontology Annotation List
DOLiteTerm              Disease Ontology Annotation Vector
GeneAnswers-class       Class GeneAnswers: contain and describe the
                        relationship between given gene data and
                        specified category
GeneAnswers-package     Integrated Interpretation of Genes
categoryNet             Plot Category Links
chartPlots              Pie Chart and Bar Plots
geneAnnotationHeatmap   Make a concept-gene cross tabulation
geneAnswersBuilder      Build an object of a GeneAnswers class
geneAnswersChartPlots   Make pie chart and bar plot
geneAnswersConceptNet   Concept-Gene Networking Plotting
geneAnswersConcepts     Concept-Gene Networking Plotting
geneAnswersHeatmap      Generate Concept-Gene Tabulates
geneAnswersHomoMapping
                        Mapping homogenes for a GeneAnswers instance
geneAnswersReadable     Make GeneAnswers Instance readable
geneAnswersSort         Sort enrichmentInfo of a GeneAnswers instance
geneConceptNet          Generate Concept-gene network
getCategoryList         Retrieve categories containing given genes
getCategoryTerms        Convert Category IDs to Terms
getDOLiteTerms          Get DOLite Terms of Given DOLite IDs
getGOList               Get GO list of given genes
getHomoGeneIDs          Get homologous genes of given genes
getPATHList             Retrieve KEGG categories containing given genes
getPATHTerms            Get Pathway names of given KEGG IDs
getSymbols              Convert entrez gene IDs to gene symbols
humanExpr               Example human expression data
humanGeneInput          Example human gene data
mouseExpr               Example mouse expression data
mouseGeneInput          Example mouse gene data
searchEntrez            Search specified information from Entrez site
topCategory             Present top enrichment test information
topCategoryGenes        Present top enrichment test information with
                        genes
topDOLite               Present top DOLite enrichment test information
topDOLiteGenes          Present top DOLite enrichment test information
                        with genes
topGO                   Present top GO enrichment test information
topGOGenes              Present top GO enrichment test information with
                        genes
topPATH                 Present top KEGG enrichment test information
topPATHGenes            Present top KEGG enrichment test information
                        with genes
