crlmm-package	crlmm-package
$,CrlmmSetList-method	CrlmmSetList-class
A	ABset-class
A,ABset-method	ABset-class
A,CrlmmSetList-method	CrlmmSetList-class
A<-	CrlmmSetList-class
A<-,ABset,matrix-method	ABset-class
A<-,CrlmmSetList,matrix-method	CrlmmSetList-class
ABset-class	ABset-class
addFeatureAnnotation	CrlmmSetList-class
addFeatureAnnotation,CrlmmSetList-method	CrlmmSetList-class
B	ABset-class
B,ABset-method	ABset-class
B,CrlmmSetList-method	CrlmmSetList-class
B<-	CrlmmSetList-class
B<-,ABset,matrix-method	ABset-class
B<-,CrlmmSetList,matrix-method	CrlmmSetList-class
batch	batch
batch,CopyNumberSet-method	CopyNumberSet-class
batch,CrlmmSetList-method	CrlmmSetList-class
CA	CopyNumberSet-class
CA,CopyNumberSet-method	CopyNumberSet-class
CA,CrlmmSetList-method	CrlmmSetList-class
CA<-	CopyNumberSet-class
CA<-,CopyNumberSet,matrix-method	CopyNumberSet-class
CA<-,CrlmmSetList,matrix-method	CrlmmSetList-class
calls	methods-SnpSet
calls,CrlmmSetList-method	CrlmmSetList-class
calls,SnpSet-method	methods-SnpSet
CB	CopyNumberSet-class
CB,CopyNumberSet-method	CopyNumberSet-class
CB,CrlmmSetList-method	CrlmmSetList-class
CB<-	CopyNumberSet-class
CB<-,CopyNumberSet,matrix-method	CopyNumberSet-class
CB<-,CrlmmSetList,matrix-method	CrlmmSetList-class
celDates	celDates
chromosome	methods-eSet
chromosome,CopyNumberSet-method	CopyNumberSet-class
chromosome,CrlmmSetList-method	CrlmmSetList-class
chromosome,eSet-method	methods-eSet
cnIndex	methods-eSet
cnIndex,CrlmmSetList-method	CrlmmSetList-class
cnIndex,eSet-method	methods-eSet
cnrma	cnrma
combine,CrlmmSetList,CrlmmSetList-method	CrlmmSetList-class
computeCopynumber	computeCopynumber
confs	methods-SnpSet
confs,CrlmmSetList-method	CrlmmSetList-class
confs,SnpSet-method	methods-SnpSet
copyNumber,CopyNumberSet-method	CopyNumberSet-class
copyNumber,CrlmmSetList-method	CrlmmSetList-class
CopyNumberSet-class	CopyNumberSet-class
crlmm	crlmm
crlmmIllumina	crlmmIllumina
CrlmmSetList-class	CrlmmSetList-class
crlmmWrapper	crlmmWrapper
ellipse,CopyNumberSet-method	CopyNumberSet-class
list.celfiles	list.celfiles
ncol,CrlmmSetList-method	CrlmmSetList-class
nrow,CrlmmSetList-method	CrlmmSetList-class
plot,ABset,CopyNumberSet-method	CopyNumberSet-class
plot,CrlmmSetList,ANY-method	CrlmmSetList-class
points,CrlmmSetList-method	CrlmmSetList-class
position	methods-eSet
position,CopyNumberSet-method	CopyNumberSet-class
position,CrlmmSetList-method	CrlmmSetList-class
position,eSet-method	methods-eSet
readIdatFiles	readIdatFiles
sampleNames,CrlmmSetList-method	CrlmmSetList-class
show,CrlmmSetList-method	CrlmmSetList-class
snpIndex	methods-eSet
snpIndex,CrlmmSetList-method	CrlmmSetList-class
snpIndex,eSet-method	methods-eSet
snprma	snprma
update,character-method	CrlmmSetList-class
update,CrlmmSetList-method	CrlmmSetList-class
[,CrlmmSetList-method	CrlmmSetList-class
