# Collection of annotation related methods for mass spectrometry data

## Documentation for package ‘CAMERA’ version 1.2.0

## User Guides and Package Vignettes

Read overview or browse directory.

## Help Pages

annotate | Deconvolute/Annotate LC/ESI-MS data
annotate,xsAnnotate-methods | Deconvolute/Annotate LC/ESI-MS data
findAdducts | Calculate Adducts and Annotate LC/ESI-MS Spectra
findAdducts,xsAnnotate-method | Calculate Adducts and Annotate LC/ESI-MS Spectra
findIsotopes | Deconvolute/Annotate LC/ESI-MS data
findIsotopes,xsAnnotate-method | Deconvolute/Annotate LC/ESI-MS data
getPeaklist | Retrieve the annotatad peaklist
getpspectra | Retrieve a spectra-group peaklist
groupCorr | EIC correlation grouping of LC/ESI-MS data
groupCorr,xsAnnotate-method | EIC correlation grouping of LC/ESI-MS data
groupFWHM | FWHM-Grouping of LC/ESI-MS data
groupFWHM,xsAnnotate-method | FWHM-Grouping of LC/ESI-MS data
mm14 | Extract of marker mixture 14 LC/MS data
plotEICs | Plot extracted ion chromatograms from (multiple) Pseudospectra
plotEICs,xsAnnotate-method | Plot extracted ion chromatograms from (multiple) Pseudospectra
plotEICs.xsAnnotate | Plot extracted ion chromatograms from (multiple) Pseudospectra
plotPeaks | Plot a Pseudospectrum
plotPeaks,xsAnnotate-method | Plot a Pseudospectrum
plotPeaks.xsAnnotate | Plot a Pseudospectrum
show,xsAnnotate-method | Class xsAnnotate, a class for annotate peak data
xsAnnotate | Constructor for a xsAnnotate object which one assigned xcmsSet object
xsAnnotate-class | Class xsAnnotate, a class for annotate peak data