# FHCRC Nelson Lab mpedbarray Annotation Data (mpedbarray)

## Documentation for package ‘mpedbarray.db’ version 2.2.5

## Help Pages

mpedbarray | Bioconductor annotation data package
mpedbarrayACCNUM | Map Manufacturer identifiers to GenBank Accession Numbers
mpedbarrayALIAS2PROBE | Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
mpedbarrayCHR | Map Manufacturer IDs to Chromosomes
mpedbarrayCHRLENGTHS | A named vector for the length of each of the chromosomes
mpedbarrayCHRLOC | Map Manufacturer IDs to Chromosomal Location
mpedbarrayCHRLOCEND | Map Manufacturer IDs to Chromosomal Location
mpedbarrayENSEMBL | Map Ensembl gene acession numbers with Entrez Gene identifiers
mpedbarrayENSEMBL2PROBE | Map Ensembl gene acession numbers with Entrez Gene identifiers
mpedbarrayENTREZID | Map between Manufacturer Identifiers and Entrez Gene
mpedbarrayENZYME | Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
mpedbarrayENZYME2PROBE | Map between Enzyme Commission Numbers and Manufacturer Identifiers
mpedbarrayGENENAME | Map between Manufacturer IDs and Genes
mpedbarrayGO | Map between Manufacturer IDs and Gene Ontology (GO)
mpedbarrayGO2ALLPROBES | Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
mpedbarrayGO2PROBE | Map between Gene Ontology (GO) and Manufacturer Identifiers
mpedbarrayLOCUSID | Map between Manufacturer Identifiers and Entrez Gene
mpedbarrayMAP | Map between Manufacturer Identifiers and cytogenetic maps/bands
mpedbarrayMAPCOUNTS | Number of mapped keys for the maps in package mpedbarray.db
mpedbarrayMGI | Map MGI gene accession numbers with manufacturer identifiers
mpedbarrayMGI2PROBE | Map MGI gene accession numbers with manufacturer identifiers
mpedbarrayORGANISM | The Organism for mpedbarray
mpedbarrayPATH | Mappings between probe identifiers and KEGG pathway identifiers
mpedbarrayPATH2PROBE | Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
mpedbarrayPFAM | Map Manufacturer IDs to Pfam IDs
mpedbarrayPMID | Map between Manufacturer Identifiers and PubMed Identifiers
mpedbarrayPMID2PROBE | Map between PubMed Identifiers and Manufacturer Identifiers
mpedbarrayPROSITE | Map Manufacturer IDs to PROSITE ID
mpedbarrayREFSEQ | Map between Manufacturer Identifiers and RefSeq Identifiers
mpedbarraySYMBOL | Map between Manufacturer Identifiers and Gene Symbols
mpedbarrayUNIGENE | Map between Manufacturer Identifiers and UniGene cluster identifiers
mpedbarrayUNIPROT | Map Uniprot accession numbers with Entrez Gene identifiers
mpedbarrayUNIPROT2PROBE | Map Uniprot accession numbers with Entrez Gene identifiers
mpedbarray_dbconn | Collect information about the package annotation DB
mpedbarray_dbfile | Collect information about the package annotation DB
mpedbarray_dbInfo | Collect information about the package annotation DB
mpedbarray_dbschema | Collect information about the package annotation DB