gahgu133bUNIPROT          package:gahgu133b          R Documentation

_M_a_p _b_e_t_w_e_e_n _c_u_s_t_o_m _p_r_o_b_e_s_e_t _I_d_e_n_t_i_f_i_e_r_s _a_n_d _U_n_i_p_r_o_t _s_i_m_i_l_a_r_i_t_i_e_s _a_n_d _d_o_m_a_i_n_s _i_n_f_o_r_m_a_t_i_o_n

_D_e_s_c_r_i_p_t_i_o_n:

     gahgu133bUNIPROT is an R environment that provides mappings
     between custom probeset identifiers and Interpro domains of
     corresponding protein.

_D_e_t_a_i_l_s:

     Each identifier is mapped to a named vector containing Uniprot
     information about similarities and domains. An 'NA' is reported if
     there is no Uniprot information for a given gene.

     Each element name of named vector indicates wether corresponding
     element refers to similarity or domain information from Uniprot.

     Mappings were based on data provided by:

     GeneCards database - www.genecards.org

     Package built Mon Aug 25 17:25:49 2008

_R_e_f_e_r_e_n_c_e_s:

     <URL: www.genecards.org>

_E_x_a_m_p_l_e_s:

         # Convert the environment to a list
         xx <- as.list(gahgu133bUNIPROT)
         if(length(xx) > 0){
             # The Uniprot domains or similarities for the first two elements of XX
             xx[1:2]
             # Get the first one
             xx[[1]]
         }

