# Affymetrix Arabidopsis Genome Array annotation data (chip ag)

## Documentation for package ‘ag.db’ version 2.2.7

## Help Pages

ag | Bioconductor annotation data package
agACCNUM | Map between manufacturer IDs and AGI locus IDs
agARACYC | Mappings between probe identifiers and KEGG pathway identifiers
agARACYCENZYME | Map between Manufacturer IDs and Enzyme Names from ARACYC
agCHR | Map Manufacturer IDs to Chromosomes
agCHRLENGTHS | A named vector for the length of each of the chromosomes
agCHRLOC | Map Manufacturer IDs to Chromosomal Location
agCHRLOCEND | Map Manufacturer IDs to Chromosomal Location
agENZYME | Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
agENZYME2PROBE | Map between Enzyme Commission Numbers and Manufacturer Identifiers
agGENENAME | Map between Manufacturer IDs and Genes
agGO | Map between Manufacturer IDs and Gene Ontology (GO)
agGO2ALLPROBES | Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
agGO2PROBE | Map between Gene Ontology (GO) and Manufacturer Identifiers
agMAPCOUNTS | Number of mapped keys for the maps in package ag.db
agORGANISM | The Organism for ag
agPATH | Mappings between probe identifiers and KEGG pathway identifiers
agPATH2PROBE | Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
agPMID | Map between Manufacturer Identifiers and PubMed Identifiers
agPMID2PROBE | Map between PubMed Identifiers and Manufacturer Identifiers
agSYMBOL | Map between Manufacturer Identifiers and Gene Symbols
ag_dbconn | Collect information about the package annotation DB
ag_dbfile | Collect information about the package annotation DB
ag_dbInfo | Collect information about the package annotation DB
ag_dbschema | Collect information about the package annotation DB