PPIEX             package:simulatorAPMS             R Documentation

_P_r_o_t_e_i_n-_p_r_o_t_e_i_n _c_o-_m_e_m_b_e_r_s_h_i_p _g_r_a_p_h _m_a_t_r_i_x

_D_e_s_c_r_i_p_t_i_o_n:

     From the matrix of ISI, we can derive the PPCM matrix by the
     multiplication: ISI

_U_s_a_g_e:

     data(PPIEX)

_F_o_r_m_a_t:

     The format is: num [1:35, 1:35] 1 0 0 0 0 0 0 0 0 0 ... - attr(*,
     "dimnames")=List of 2 ..$ : chr [1:35] "YAL015C" "YAL017W"
     "YAL021C" "YAL036C" ... ..$ : chr [1:35] "YAL015C" "YAL017W"
     "YAL021C" "YAL036C" ...

_D_e_t_a_i_l_s:

     This is an example PPCM where both the rows and the columns are
     indexed by the proteins present in the organism or cell. Here an
     entry of 1 means that two proteins share co-membership in some
     complex.

_E_x_a_m_p_l_e_s:

     data(PPIEX)

