Entry: LGchangeLog
Aliases: LGchangeLog
Keywords: documentation
Description: LimmaGUI Change Log
URL: ../../../library/limmaGUI/html/LGchangelog.html

Entry: limmaGUI
Aliases: AboutLimmaGUI AboutNormalization BChelp ChooseContrastsParameterization chooseDir ChooseEbayesStatistic ChooseParameterization ChoosePlotSymbolByClicking ChooseSpotType ComputeContrasts ComputeLinearModelFit CopyGraph CreateNewParameterization CreateTreeAndList DeleteContrastsParameterization deleteItemFromList DeleteParameterization DupCorBoxPlot ebayesBoxPlots evalRcode ExportAvalues ExportHTMLreport ExportMvalues ExportTopTable fixSeps GetBackgroundCorrectionMethod GetBetweenArrayNormalizationMethod GetCoef GetComponentsToExportInHTMLreport GetContrastsParameterizationNames GetContrastsParameterizationName GetDEcutoff GetDesignOrContrasts GetGeneLabelsOptions GetGenePixFlagWeightings GetImageAnalysisColumnHeadings GetImageProcessingFileType GetJpegOrPngParams GetJpegOrPngX11Params GetlimmaDataSetName GetlmFitMethod GetLowessType GetNEWxlim GetNormexpOffsetValue GetNumParametersNoTargets getPackageVersion GetParameterizationName GetParameterNames GetParametersAndOrContrasts GetPlotLabels GetPlotSize GetPlotTitle GetPValueCutoff GetReducedDuplicateSpacing GetRNATypesFrom.ContrastsFromDropDowns.String GetSlideNum GetSpotTypesForLinearModel GetSpotTypesIncludedNames GetWithinArrayNormalizationMethod GetWtAreaParams HeatDiagramDialog HeatDiagramPlot HowManyDups HTMLplotUsingFunction ImageArrayPlotDialog ImageArrayPlot imageplotlimmaGUI ImportMADialog ImportMA initGlobals InitNewParameterization limmaGUIhelp limmaGUI limmaHelp limmaUsersGuide lmFitMethodHelp LogOddsPlot MAPlotAvg MAPlot MBoxPlot MMPlot NewLimmaFile NormalizeNow nstrstr onDestroy onExit OpenALimmaFile OpenGALandTargetsandSpotTypesfiles OpenGALFile OpenLimmaFile OpenSpotTypesFile OpenTargetsFile plotMAColorCoded PlotOptions PrintTipGroupMAPlot QQTplot read.marrayTools readGALlimmaGUI ReadImageProcessingFiles Require Resize SaveAsLimmaFile SaveGraphAsJpeg SaveGraphAsPDF SaveGraphAsPNG SaveGraphAsPostscript SaveLimmaFile SelectPlotSymbols SetLayoutParameters SetupPlotKeyBindings SetupPlotMenus SetWD showChangeLog showCitations showGAL showTopTable SimplifyContrastsExpression strstr tclArrayVar TclRequire TryReadImgProcFile Try UpdateSpotTypesStatus UpDownOrBoth vennDiagramlimmaGUI VennDiagramPlot ViewDesignOrContrastsMatrixAsPairs ViewDesignOrContrastsMatrixInTable ViewExistingContrastsParameterization ViewExistingParameterization ViewRNATargets ViewSpotTypes WithinBetweenOrBoth wtflags2
Keywords: IO
Description: Graphical User Interface for the limma microarray package
URL: ../../../library/limmaGUI/html/limmaGUI.html
