makeIdeogram          package:GenomeGraphs          R Documentation

_C_r_e_a_t_e_s _o_b_j_e_c_t _o_f _c_l_a_s_s _I_d_e_o_g_r_a_m

_D_e_s_c_r_i_p_t_i_o_n:

     Creates object of class Ideogram

_U_s_a_g_e:

     makeIdeogram(chromosome, dp = NULL)

_A_r_g_u_m_e_n_t_s:

chromosome: Chromosome to represent (currently human only) 

      dp: Display parameters such as color and size

_V_a_l_u_e:

     Object of class Ideogram

_A_u_t_h_o_r(_s):

     Jim Bullard and Steffen Durinck

_R_e_f_e_r_e_n_c_e_s:

     ~put references to the literature/web site here ~

_S_e_e _A_l_s_o:

     'gdPlot'

_E_x_a_m_p_l_e_s:

     ##---- Should be DIRECTLY executable !! ----
     ##-- ==>  Define data, use random,
     ##--    or do  help(data=index)  for the standard data sets.

     ## The function is currently defined as
     function (chromosome, dp = NULL) 
     {
         if (missing(chromosome)) 
             stop("Need to specify chromosome for creating an Ideogram")
         if (is.numeric(chromosome)) {
             chromosome = as.character(chromosome)
         }
         if (is.null(dp)) 
             dp <- getClass("Ideogram")@prototype@dp
         new("Ideogram", chromosome = chromosome, dp = dp)
       }

