Entry: CNA
Aliases: CNA print.CNA
Keywords: nonparametric
Description: Create 'Copy Number Array' data object
URL: ../../../library/DNAcopy/html/CNA.html

Entry: DNAcopy-internal
Aliases: changepoints changepoints.prune changepoints.sdundo smooth.data trimmed.variance inflfact exon.changepoint
Keywords: internal
Description: Internal DNAcopy functions
URL: ../../../library/DNAcopy/html/DNAcopy-internal.html

Entry: DNAcopy
Aliases: DNAcopy print.DNAcopy
Keywords: nonparametric
Description: Results of segmenting a CNA data object
URL: ../../../library/DNAcopy/html/DNAcopy.html

Entry: coriell
Aliases: coriell
Keywords: datasets
Description: Array CGH data set of Coriell cell lines
URL: ../../../library/DNAcopy/html/coriell.html

Entry: cytoBand
Aliases: cytoBand
Keywords: datasets
Description: Cytogenic band data
URL: ../../../library/DNAcopy/html/cytoBand.html

Entry: exon.segment
Aliases: exon.segment
Keywords: nonparametric
Description: Binary segmentation of exon data.
URL: ../../../library/DNAcopy/html/exon.segment.html

Entry: getbdry
Aliases: getbdry default.DNAcopy.bdry
Keywords: nonparametric
Description: Sequential stopping boundary
URL: ../../../library/DNAcopy/html/getbdry.html

Entry: plot.DNAcopy
Aliases: plot.DNAcopy
Keywords: nonparametric
Description: Plot the data and results from segment of a CNA object
URL: ../../../library/DNAcopy/html/plot.DNAcopy.html

Entry: segment
Aliases: segment
Keywords: nonparametric
Description: Genome Segmentation Program
URL: ../../../library/DNAcopy/html/segment.html

Entry: segments.p
Aliases: segments.p
Keywords: nonparametric
Description: p-values for the change-points
URL: ../../../library/DNAcopy/html/segments.p.html

Entry: segments.summary
Aliases: segments.summary
Keywords: nonparametric
Description: Additional summary measured for the segments
URL: ../../../library/DNAcopy/html/segments.summary.html

Entry: smooth.CNA
Aliases: smooth.CNA
Keywords: nonparametric
Description: Smooth a 'Copy Number Array' data object
URL: ../../../library/DNAcopy/html/smooth.CNA.html

Entry: subset.CNA
Aliases: subset.CNA
Keywords: nonparametric
Description: Subset a 'Copy Number Array' data object
URL: ../../../library/DNAcopy/html/subset.CNA.html

Entry: subset.DNAcopy
Aliases: subset.DNAcopy
Keywords: nonparametric
Description: Subset a DNAcopy data object
URL: ../../../library/DNAcopy/html/subset.DNAcopy.html
