Entry: BSParams-class
Aliases: class:BSParams BSParams-class BSParams
Keywords: classes
Description: Class "BSParams"
URL: ../../../library/BSgenome/html/BSParams-class.html

Entry: BSgenome-class
Aliases: class:BSgenome BSgenome-class BSgenome organism organism,BSgenome-method species species,BSgenome-method provider provider,BSgenome-method providerVersion providerVersion,BSgenome-method releaseDate releaseDate,BSgenome-method releaseName releaseName,BSgenome-method sourceUrl sourceUrl,BSgenome-method seqnames seqnames,BSgenome-method seqlengths seqlengths,BSgenome-method mseqnames mseqnames,BSgenome-method names,BSgenome-method masknames masknames,BSgenome-method BSgenome show,BSgenome-method length,BSgenome-method [[,BSgenome-method [[<-,BSgenome-method $,BSgenome-method
Keywords: methods classes
Description: The BSgenome class
URL: ../../../library/BSgenome/html/BSgenome-class.html

Entry: BSgenomeForge
Aliases: BSgenomeForge BSgenomeDataPkgSeed class:BSgenomeDataPkgSeed BSgenomeDataPkgSeed-class forgeBSgenomeDataPkg forgeBSgenomeDataPkg,BSgenomeDataPkgSeed-method forgeBSgenomeDataPkg,list-method forgeBSgenomeDataPkg,character-method forgeSeqlengthsFile forgeSeqFiles forgeMasksFiles
Keywords: manip
Description: The BSgenomeForge functions
URL: ../../../library/BSgenome/html/BSgenomeForge.html

Entry: available.genomes
Aliases: available.genomes
Keywords: manip
Description: available.genomes
URL: ../../../library/BSgenome/html/available.genomes.html

Entry: bsapply
Aliases: bsapply
Keywords: manip
Description: bsapply
URL: ../../../library/BSgenome/html/bsapply.html

Entry: getSeq
Aliases: getSeq
Keywords: manip
Description: getSeq
URL: ../../../library/BSgenome/html/getSeq.html

Entry: injectSNPs
Aliases: injectSNPs injectSNPs,BSgenome-method SNPlocs_pkgname SNPlocs_pkgname,BSgenome-method SNPcount SNPcount,BSgenome-method SNPlocs SNPlocs,BSgenome-method available.SNPs
Keywords: manip
Description: SNP injection
URL: ../../../library/BSgenome/html/injectSNPs.html
