Class "proboStruct"

Description

structure for managing proboscis plot data

Objects from the Class

Objects can be created by calls of the form new("proboStruct", ...).

Slots

.Data:

Object of class "list" ~~

call:

Object of class "call" ~~

Extends

Class "list", from data part. Class "vector", by class "list", distance 2. Class AssayData-class, by class "list", distance 2.

Methods

plot

Note

The proboscis plot shows how the probability of self-consistent monotone titration (SCMT) varies with the spiked difference in concentrations of two mRNA preparations in an MAQC dataset.

Author(s)

V Carey <stvjc@channing.harvard.edu>

References

For Figure 2 of Shippy et al., Using RNA sample titrations... (Nat Biotech, 24(9):1123-1131, Sep 2006)

Examples

data(afxsubRMAES)
NN1 = proboscis(afxsubRMAES)
plot(NN1)
showClass("proboStruct")