Package: RDAVIDWebService
Type: Package
Title: An R Package for retrieving data from DAVID into R objects using
        Web Services API.
Version: 1.2.0
Date: 2014-04-07
Author: Cristobal Fresno and Elmer A. Fernandez
Maintainer: Cristobal Fresno <cfresno@bdmg.com.ar>
Description: Tools for retrieving data from the Database for
        Annotation, Visualization and Integrated Discovery (DAVID)
        using Web Services into R objects. This package offers the main
        functionalities of DAVID website including: i) user friendly
        connectivity to upload gene/background list/s, change
        gene/background position, select current specie/s, select
        annotations, etc. ii) Reports of the submitted Gene List,
        Annotation Category Summary, Gene/Term Clusters, Functional
        Annotation Chart, Functional Annotation Table
License: GPL (>=2)
URL: http://www.bdmg.com.ar, http://david.abcc.ncifcrf.gov/
Imports: Category, GO.db, RBGL, rJava
Depends: R (>= 2.14.1), methods, graph, GOstats, ggplot2
Collate: 'DAVIDdemo-ids.R' 'DAVIDdemo-geneList.R'
        'DAVIDdemo-annotationSummary.R'
        'DAVIDdemo-functionalAnnotationChart.R'
        'DAVIDdemo-annotationTable.R' 'DAVIDdemo-clusterReport.R'
        'DAVIDResult-class.R' 'DAVIDGenes-class.R'
        'DAVIDFunctionalAnnotationChart-class.R' 'DAVIDCluster-class.R'
        'DAVIDGeneCluster-class.R' 'DAVIDTermCluster-class.R'
        'DAVIDFunctionalAnnotationTable-class.R' 'DAVIDGODag-class.R'
        'DAVIDWebService-class.R' 'DAVIDClasses-show.R'
        'DAVIDClasses-ids.R' 'DAVIDClasses-plot2D.R'
        'DAVIDClasses-summary.R' 'DAVIDClasses-genes.R'
        'DAVIDClasses-categories.R' 'DAVIDResult-getters.R'
        'DAVIDGenes-methods.R' 'DAVIDCluster-methods.R'
        'DAVIDFunctionalAnnotationTable-methods.R'
        'DAVIDGODag-methods.R' 'DAVIDWebService-accessors.R'
        'DAVIDWebService-methods.R' 'DAVIDWebService-reports.R'
        'DAVIDClasses-constructor.R' 'RDAVIDWebService-package.R'
Suggests: Rgraphviz
InstallableEverywhere: yes
biocViews: Visualization, DifferentialExpression, ExperimentData,
        Cancer
Packaged: 2014-04-12 06:17:03 UTC; biocbuild
Built: R 3.1.0; ; 2014-04-12 11:36:41 UTC; unix
