![[R logo]](../../../doc/html/logo.jpg){kind=logo}
![[Up]](../../../doc/html/left.jpg){kind=small}
![[Top]](../../../doc/html/up.jpg){kind=small}
| rTANDEM-package | An R encapsulation of X!TANDEM CYCLONE (2010.12.01.1) |
| GetDegeneracy | Extract information from rTANDEM result object |
| GetParamFromXML | Convert X!Tandem xml files to R objects and vice versa |
| GetPeptides | Extract information from rTANDEM result object |
| GetProteins | Extract information from rTANDEM result object |
| GetResultsFromXML | Convert X!Tandem xml files to R objects and vice versa |
| GetTaxoFromXML | Convert X!Tandem xml files to R objects and vice versa |
| rTANDEM | Calls X!TANDEM CYCLONE (2011.12.01.1) from R objects or xml files |
| rtandem | Calls X!TANDEM CYCLONE (2011.12.01.1) from R objects or xml files |
| rTParam | rTANDEM S3 and S4 classes |
| rTResult | rTANDEM S3 and S4 classes |
| rTResult-class | Class '"rTResult"' |
| rTTaxo | rTANDEM S3 and S4 classes |
| setParamValue | rTANDEM S3 and S4 classes |
| tandem | Calls X!TANDEM CYCLONE (2011.12.01.1) from R objects or xml files |
| WriteParamToXML | Convert X!Tandem xml files to R objects and vice versa |
| WriteTaxoToXML | Convert X!Tandem xml files to R objects and vice versa |