BinData-class           Class "BinData"
MosaicsFit-class        Class "MosaicsFit"
MosaicsPeak-class       Class "MosaicsPeak"
constructBins           Construct bin-level ChIP-sep data from an
                        aligned read file
estimates               Extract estimates of the fitted MOSAiCS model
export                  Export peak calling results to text files
generateWig             Construct wiggle files from an aligned ChIP-sep
                        read file
mosaics-package         MOSAiCS (MOdel-based one and two Sample
                        Analysis and Inference for ChIP-Seq)
mosaicsFit              Fit MOSAiCS model
mosaicsPeak             Call peaks using fitted MOSAiCS model
mosaicsRunAll           Analyze ChIP-seq data using the MOSAiCS
                        framework
readBins                Import bin-level ChIP-sep data
