87aa6e192dd4cf29778df112cc272376 *DESCRIPTION
e5f691d8d96257bc3e158560c1dc072c *INDEX
544a2b08f06c072d8ba94c1181df56d3 *Meta/Rd.rds
7a261b733166a4722a271af16addd9ab *Meta/data.rds
84b38fb07ba340b5b46c090a803de463 *Meta/hsearch.rds
5b09bf8406006c0439d3d347d860798c *Meta/links.rds
43f9a40aba3b5a18642a6cd0bcd41252 *Meta/nsInfo.rds
7c6cce595364f3aff515320366995a96 *Meta/package.rds
6c733de6474df899c2b974a1018ad38a *Meta/vignette.rds
54a6a6f96a55ef144954f576ce91d497 *NAMESPACE
9cf2f7b64ecb29e42017b531244dd2d8 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/cummeRbund
6ea1493967dde70db54c006d57c59819 *R/cummeRbund.rdb
6be540f1770d236d3d14f9f8b0f61bf0 *R/cummeRbund.rdx
95effbbbf6135a883a9cd3fbe1620eb5 *data/sampleData.RData
47cd8deb604624196a30cf60abf12bc5 *doc/ENCODE_SCV.pdf
ebcb935dba061978418ebae0aa4a7392 *doc/cuffData_schema.pdf
5d7f299ca2333d20f04c71e008db73bd *doc/cummeRbund-example-workflow.R
1cf17ce4c24507288a5272fd72003c6b *doc/cummeRbund-example-workflow.Rnw
6ca11114ee82be49cc0625d4f30068dd *doc/cummeRbund-example-workflow.pdf
0d625f0e72f76fdf76df961d8dfbc011 *doc/cummeRbund-manual.R
7597b69c2dfdda59c8702cf134706ea6 *doc/cummeRbund-manual.Rnw
9dea320dfd1673e3840becb46e1eb371 *doc/cummeRbund-manual.pdf
963e026b0d4ef474a3acd5d4b3f79c18 *doc/index.html
d750866aa0c9df7b8a2416b605aad636 *extdata/cds.count_tracking
55054b333f3d37b29ec9c8d4ed247a5c *extdata/cds.diff
872cf05900e727e0d71b270d0ff53bea *extdata/cds.fpkm_tracking
bf863abcbbb9eab2b6dc4742ecfa010c *extdata/cds.read_group_tracking
7ea0edf89f0ddc5e834cb5466288d4b1 *extdata/cds_exp.diff
268c5340a737a3c211bcacc1a1c13693 *extdata/chr1_snippet.gtf
b926443705216b33fe2965e730efb46a *extdata/cuffData_schema.sql
8a5e8a2753eba7b6667dbe215a248fee *extdata/gene_exp.diff
af41baca8b3e26509452c2436d234d65 *extdata/genes.count_tracking
145fd3994f9648d5ada1d604e24c365c *extdata/genes.fpkm_tracking
c563202c95aa9aeaa08e4bf759a77df5 *extdata/genes.read_group_tracking
6157f98d3b7081152fcad9898a970a74 *extdata/isoform_exp.diff
d26a4ce41f3537165f5ec8720005fb5e *extdata/isoforms.count_tracking
3df37bd586fc05d216f551cdb8a25ff8 *extdata/isoforms.fpkm_tracking
732428dd0ee431d16139debde986a780 *extdata/isoforms.read_group_tracking
05a7e6754b834b16efeab5f32b761338 *extdata/promoters.diff
5504299772cc9202185abcb03fa8c31c *extdata/read_groups.info
4302c47866e67a5ccb87015bb4cfad4b *extdata/run.info
76743810e9158eadc8454d59bd2fb5e1 *extdata/splicing.diff
2ad3e5a485eba94a838bac21160715f5 *extdata/tss_group_exp.diff
d52d7fac3419d9e4158faa8972302c2f *extdata/tss_groups.count_tracking
5f6fcb9d599665971639f3b53dc40a54 *extdata/tss_groups.fpkm_tracking
dd6e1ea022372357ee00868068b80586 *extdata/tss_groups.read_group_tracking
2c2ef2a1901b6b96cd40025686951adb *help/AnIndex
345b4b77c9d2c722d458058971fe512f *help/aliases.rds
94205a22cffb0d528a748c170c18d829 *help/cummeRbund.rdb
2bef4565eaa31ab2c6052351c2b06859 *help/cummeRbund.rdx
a48590cc9d78d2b9fa1b5784035b024b *help/paths.rds
d8ebf1ad0b55eaa173d2392d45de7e37 *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
c418b300973b33a65f28926ad1846a8f *reports/runReport.Rmd
108ea596a90bb417881a41977c59e3ab *reports/runReport.Rnw
