import("SSOAP")
import("XML")
import("RCurl")
import("BiocGenerics")

export(color.pathway.by.objects,
       get.best.best.neighbors.by.gene,
       getBestNeighbors,
       get.best.neighbors.by.gene,
       get.compounds.by.pathway,
       get.enzymes.by.pathway,
       get.genes.by.motifs,
       get.genes.by.organism,
       get.genes.by.pathway,
       get.motifs.by.gene,
       get.paralogs.by.gene,
       get.pathways.by.compounds,
       get.pathways.by.enzymes,
       get.pathways.by.genes,
       get.pathways.by.reactions,
       get.reactions.by.pathway,
       list.databases,
       list.organisms,
       list.pathways,
       mark.pathway.by.objects,
       search.compounds.by.name,
       search.glycans.by.name,
       search.compounds.by.composition,
       search.glycans.by.composition,
       search.glycans.by.mass,
       search.compounds.by.mass,
       search.compounds.by.subcomp,
       search.glycans.by.kcam,
       bget,
       bconv,
       get.ko.by.gene,
       get.ko.by.ko.class,
       get.genes.by.ko.class,
       get.genes.by.ko,
       get.kos.by.pathway,
       get.pathways.by.kos)
