686f6b49412419747eea859872a47313 *DESCRIPTION
60fa7a04187dbc7e058db4ad574eb0f9 *INDEX
3f0f635c76e78d86d95a133099067b12 *Meta/Rd.rds
8511cc60ab430d8d05c2e7b0b5adc047 *Meta/hsearch.rds
c91c3e899544e17a5c7e9be6c27ae759 *Meta/links.rds
0882e03b153bfd1365df1b6fa271c2fd *Meta/nsInfo.rds
8c602407eec8583f961df4bba8ad8915 *Meta/package.rds
8b4c10df726d252a91398007e20cbebf *Meta/vignette.rds
3904554a3765f72e4bf2d8e10009086a *NAMESPACE
f717b8d449ff7fa0794059b6e88d550d *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/GenomicRanges
196e1d13ebde5b0271c61598a6e2e6dc *R/GenomicRanges.rdb
cb288737dfbe0f50cfda81862532e6c2 *R/GenomicRanges.rdx
b717394d61b8daa2d7915cc0bc9a2556 *doc/GenomicRangesIntroduction.R
9ffa21094c874b6f02f140e00d396f9b *doc/GenomicRangesIntroduction.Rnw
17c01d0d822fd3cc22855a7f743c74dc *doc/GenomicRangesIntroduction.pdf
b6acaef9b85f01b46eae8ad7a71e796d *doc/GenomicRangesUseCases.R
e014692e0989ac8571914457303e3d0b *doc/GenomicRangesUseCases.Rnw
2999df98194207872d2ee4f32a6adb29 *doc/GenomicRangesUseCases.pdf
061803b4e72a9a065653adb3fc7f5919 *doc/OverlapEncodings.R
1f1283b1233e481c8140396184e019d9 *doc/OverlapEncodings.Rnw
00a287f5d25ec8517628862b8d3fbff2 *doc/OverlapEncodings.pdf
010e0fa01b4afec6cfbdb788858ac897 *doc/index.html
c9bf3c0706b5180be367e54e6e261ade *doc/precomputed_results/U1.sbcompHITSa.rda
c7344ec99e9adc45105579143647410c *doc/precomputed_results/U1.sbcompHITSb.rda
b813ecb6a07490912e8b714bfd97c622 *doc/precomputed_results/exbytx.rda
93f08c8abf76627655b2995b4ac3d612 *doc/summarizeOverlaps-modes.pdf
18beb6c9887b701c1f175cb48610707d *doc/summarizeOverlaps.R
d10a22f9e12bd8587e963ada6ce53337 *doc/summarizeOverlaps.Rnw
c9b7e17608fbaa97186e55dd3a259fa4 *doc/summarizeOverlaps.pdf
ffcc2b8da187a7833f24c66473b4e153 *extdata/feature_frags.txt
1c380f8159fda8fad5d0d4902ae9ea23 *extdata/sm_treated1.bam
af83f784077fcced98e3603bb7ad7a4e *extdata/sm_untreated1.bam
d07f0098aec140f3cd88f85cf1aeee51 *help/AnIndex
7967422fabc2dc5768bf4ecd6fb55148 *help/GenomicRanges.rdb
20a4d008ad3ca6bdb27951cc3a224661 *help/GenomicRanges.rdx
6d9ffff2f47283dc77d84860afb49962 *help/aliases.rds
54836b801a2872bdf6b461d7d8e62390 *help/paths.rds
e51233917eb1048170d28f7f0f44b16f *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
e9c4881015843fa351fd9cccb6e92391 *libs/i386/GenomicRanges.dll
5cc0f9ee8f64a657885514689172d7d4 *libs/x64/GenomicRanges.dll
4a3278e57441eaaa69b85e6c39dca175 *scripts/cigar_summary.R
26c89a09bed6bfae0ae50f2adce03b88 *unitTests/test_GAlignmentsList-class.R
18dea3a7f83020bf1c9ded48047b2599 *unitTests/test_GRanges-class.R
adc5f59107cefa220620dc3e8a2a82c8 *unitTests/test_GRangesList-class.R
26230df0168e39eba161c1487acb6993 *unitTests/test_GappedAlignments-class.R
f7abdde3d36a5447ffd592dce7f9ae22 *unitTests/test_Seqinfo-class.R
dc21d22dbd33d9039950b7f36e035cc8 *unitTests/test_SummarizedExperiment-class.R
b9f389d1ec96ac9092cdda8721d872f1 *unitTests/test_SummarizedExperiment-rowData-methods.R
aed5d3dd3e2c455023a01350e0203639 *unitTests/test_cigar-utils.R
dbe18c9d603bbb96ebbe324fd00bdf84 *unitTests/test_coverage-methods.R
4ebfe45e3f6f618d7148626104ee9d3b *unitTests/test_findOverlaps-methods.R
ca1cad7f248d1fb6f868ca107a3f200d *unitTests/test_findSpliceOverlaps-methods.R
5254ace0fd174f8a33c673c49f23005b *unitTests/test_inter-range-methods.R
d716d507a80d419f582fd687e98149c2 *unitTests/test_intra-range-methods.R
81a2be16d15b562a5315698f07adeb15 *unitTests/test_nearest-methods.R
4ce95bb26ed871cd13309e79f901ac7f *unitTests/test_seqlevels-utils.R
85e44001f9cf60426998d01e761cebf5 *unitTests/test_setops-methods.R
6dd9f1b3be954c3d922faf64eb1b3792 *unitTests/test_summarizeOverlaps-methods.R
8664e36ad4e4e0623d0f1495c9da56b8 *unitTests/test_utils.R
