Package: genoset
Type: Package
Title: Provides classes similar to ExpressionSet for copy number
        analysis
Version: 1.10.1
Date: 2011-01-15
Author: Peter M. Haverty
Maintainer: Peter M. Haverty <phaverty@gene.com>
Description: Load, manipulate, and plot copynumber and BAF data. GenoSet class
    extends eSet by adding a "locData" slot for a RangedData or GRanegs object.
    This object contains feature genome location data and provides for
    efficient subsetting on genome location. CNSet and BAFSet extend GenoSet
    and require assayData matrices for Copy Number (cn) or Log-R Ratio (lrr)
    and B-Allele Frequency (baf) data. Implements and provides convenience
    functions for processing of copy number and B-Allele Frequency data.
License: Artistic-2.0
LazyLoad: yes
Depends: R (>= 2.10), BiocGenerics (>= 0.1.6), Biobase (>= 2.15.1),
        IRanges (>= 1.13.5), GenomicRanges
Imports: methods, graphics, GenomicRanges
Suggests: RUnit, DNAcopy, stats
Enhances: parallel
biocViews: Infrastructure, DataRepresentation, Microarray, SNP,
        CopyNumberVariants
Collate: 'genoset-class.R' 'cnset-class.R' 'bafset-class.R'
        'DataFrame-methods.R' 'test_genoset_package.R'
ByteCompile: TRUE
Packaged: 2012-10-18 05:51:02 UTC; biocbuild
Built: R 2.15.1; i386-pc-mingw32; 2012-10-18 10:57:52 UTC; windows
Archs: i386, x64
