0d4bc93bad76cbaddebadc7b58af4c8a *DESCRIPTION
292c9459ab1f60b755cc163de6d94006 *INDEX
7fd7232cc1f98e762571e8b62e082e0e *Meta/Rd.rds
02a4cd32f999e03c50f337fe47a90957 *Meta/data.rds
2530b3aeee92701a1da51bdfab3ea01f *Meta/hsearch.rds
9f91d398e650e55b8d0c5f3f3fe39ed0 *Meta/links.rds
ae8b6c83a0d4009a7dffaec2cc9bf458 *Meta/nsInfo.rds
d8241ed3101b4ef111e5f6d2727f0129 *Meta/package.rds
86043fb170eaef9f7a9e74250ae030f6 *Meta/vignette.rds
2d599d2dfbce08daedb9d9781ad6ef42 *NAMESPACE
382ffb782eb33fcfdc296c1a9250e69c *NEWS.Rd
240d28d145138a75831809e31a480bad *R/GWASTools
6a4eb8d68613362757703a7634625c2c *R/GWASTools.rdb
ede20ac60627a9c744d3195388154b05 *R/GWASTools.rdx
0e1209f684532f16af80334795b2ab71 *data/Rdata.rdb
59f3abfd53347244c6258f2b5cbe049b *data/Rdata.rds
0b66f0dce8d9669c6f22ed38cb63ad36 *data/Rdata.rdx
946d017b33e55550c4e3a8ceb5d2d326 *doc/Affymetrix.R
f5a57df19ed24da8e8ae778d42918c31 *doc/Affymetrix.Rnw
9aa40d4bd9ed968d2a6ea36af6b4d4f5 *doc/Affymetrix.pdf
4f7aecfb96780579c4933f9766b8fcaf *doc/DataCleaning.R
f635031d7e82b7472ba5738f737a9352 *doc/DataCleaning.Rnw
5d713eca11e96c3c45b968efdf127716 *doc/DataCleaning.pdf
fcb9e20a4c4c7a7f1a3afbf2f36cbaa5 *doc/Formats.Rnw
9490645286a5f6197d04df5f236e1669 *doc/Formats.pdf
9b0100b05656cd8252c96da7c8bba654 *doc/VCF.R
c15fcbee64141162cd9b53e425a55301 *doc/VCF.Rnw
b8ce92c5736e7016b8723407037b3ecf *doc/VCF.pdf
1011472bb6c9ae28d32d210dc137b7be *doc/index.html
9d0fc8312564402cdafb7e5776464f29 *help/AnIndex
36c785765b276056857a0c8ec55549f9 *help/GWASTools.rdb
6b01df1d721568be0e9eec260d88e029 *help/GWASTools.rdx
cf60ec5717c43ac7caa57f7cbd9a7731 *help/aliases.rds
b154730baeeed2b67d5e6ba6dfb9cc2b *help/paths.rds
3ec779d3258b29f5b0d37c098dc3c0e2 *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
e3b54d351220730d601e300dfc9589aa *unitTests/BAFfromClusterMeans_test.R
d00b35111cad21912c242af66fd70464 *unitTests/BAFfromGenotypes_test.R
06f7bfb44d12818a58caa6d5dec2b590 *unitTests/GdsGenotypeReader_test.R
22781edae837bad13c196dd9424818bf *unitTests/GdsReader_test.R
d0ded5c19841cc1503221a5f0838c5cb *unitTests/GenotypeData_test.R
c6f9428a027a52be005e5d7ecee983cb *unitTests/IntensityData_test.R
128c7369072ea96ed44ecb6a496a0917 *unitTests/MatrixGenotypeReader_test.R
9ccea588eadf2dc2efdf62e9e29486d7 *unitTests/NcdfGenotypeReader_test.R
fa559973b54d74e1066b436e2fb691f5 *unitTests/NcdfIntensityReader_test.R
47c7dc43aa5a421167ace27da45bdbb4 *unitTests/NcdfReader_test.R
67a1ce964be00d7180723bba030a3031 *unitTests/ScanAnnotationDataFrame_test.R
31212b6719dbe4e1556ea81d2dc3550d *unitTests/ScanAnnotationSQLite_test.R
9f19613050c5c0df376ef2a92d9a772a *unitTests/SnpAnnotationDataFrame_test.R
1a80659c616a9893e849e04c84cf5bb8 *unitTests/SnpAnnotationSQLite_test.R
d6b2af6d420d8648d72c49b6d589c0f4 *unitTests/alleleFrequency_test.R
8d89dc9ff9002416ca4cfcb4d072fc54 *unitTests/allequal_test.R
57398362ee4a3abeff7db5717d36828d *unitTests/anomDetectBAF_test.R
dc188b62be9fa7f6cb0cb54f5ecff29b *unitTests/apartSnpSelection_test.R
6eb9da30c01a2a500f79d0d061c50c2e *unitTests/batchChisqTest_test.R
136ed11a971891aaa450b90283c59bab *unitTests/batchFisherTest_test.R
171c24a2a4e4038d73a642c6c6150b6c *unitTests/chromIntensityPlot_test.R
dd037096314ec712d8841d300365853d *unitTests/convertNcdfGds_test.R
3858c66f9a145e78b8022b086f308f69 *unitTests/duplicateDiscordanceAcrossDatasets_test.R
2caa4087629cd246ca60a98a0ab55d91 *unitTests/duplicateDiscordance_test.R
905598138226fdc90c7e5bd3f553c024 *unitTests/findBAFvariance_test.R
30a56126cc8657ec956f96c87da4177e *unitTests/getobj_test.R
f8a135a1fcf3c0f383a1e60670baa28e *unitTests/hetByScanChrom_test.R
5a9474736f609b96247bc0b0a61342d6 *unitTests/hetBySnpSex_test.R
0d7c0a72a92af6b3a3b91a5958cb6324 *unitTests/ibdPlot_test.R
a15a23f3e5d975b61df1eb5b7c2c93b6 *unitTests/meanIntensityByScanChrom_test.R
41a5a01831ecd828cda4af98007c366e *unitTests/missingGenotypeByScanChrom_test.R
a3205fde64f25df663b03c972970a489 *unitTests/missingGenotypeBySnpSex_test.R
68d9419d296f7595d112f8bd3bacebe0 *unitTests/ncdfAddData_test.R
bc096c941f8988ada867da3569d0113b *unitTests/ncdfAddIntensity_test.R
a1c8356641bcd4f779689b5eeb96b5f2 *unitTests/ncdfCheckGenotype_test.R
e7b61a3490a9cefbe815328cd64c8d7f *unitTests/ncdfCheckIntensity_test.R
818c940bb80589e44e8e2684eba6f964 *unitTests/ncdfCreate_test.R
2cdf3768627ea1405faba4f9bf6d9b48 *unitTests/ncdfImputedDosage_test.R
5455e8e38e61067930deec3f769e4b51 *unitTests/ncdfSetMissingGenotypes_test.R
b27b180ad052d8be3b5dd15f47a8c43d *unitTests/ncdfSubset_test.R
f8768ab3b9359a33c0a05bb6626214d5 *unitTests/plinkUtils_test.R
96ce42cffea1f48d7a72f03fa48ec01e *unitTests/pseudoautoIntensityPlot_test.R
86e76d76ab0a662c41685d45623639b0 *unitTests/qualityScoreByScan_test.R
64a23402e8040c62d420a6205dbec0df *unitTests/qualityScoreBySnp_test.R
87cce94804e502b6ffda8222fbdf875a *unitTests/saveas_test.R
dc43201f321aa4549c54dc290343d110 *unitTests/snpStats_test.R
