pfamMIM2AC               package:PFAM               R Documentation

_M_a_p_p_i_n_g_s _f_r_o_m _M_I_M _I_D _t_o _A_c_c_e_s_s_i_o_n _n_u_m_b_e_r

_D_e_s_c_r_i_p_t_i_o_n:

     Mapping function from MIM ID (MIM) to the associated Accession
     number (AC)

_U_s_a_g_e:

     pfamMIM2AC(mim=NULL)

_A_r_g_u_m_e_n_t_s:

     mim: A character vector of MIM ID or NULL (default)

_D_e_t_a_i_l_s:

     If 'mim' is a vector of MIM ID,  pfamMIM2AC will return a list of
     associated Accession number for the given 'mim'.  If 'mim' is
     NULL,  pfamMIM2AC(mim=NULL) (or pfamMIM2AC()) will return a list
     of associated Accession number for all the MIM ID in the database.
     Extra information:  None More Details: MIM (a.k.a. OMIM, \<URL:
     http://www.ncbi.nlm.nih.gov/omim/>) is a catalog of human genes
     and genetic disorders authored and edited by Dr. Victor A.
     McKusick and his colleagues at Johns Hopkins and elsewhere. 
     Reference:  <MIM> MIM: McKusick, V.A.: Mendelian Inheritance in
     Man. A Catalog of Human Genes and Genetic Disorders. Baltimore:
     Johns Hopkins University Press, 1998 (12th edition). <OMIM> Online
     Mendelian Inheritance in Man, OMIM (TM). McKusick-Nathans
     Institute for Genetic Medicine, Johns Hopkins University
     (Baltimore, MD) and National Center for Biotechnology Information,
     National Library of Medicine (Bethesda, MD), 2000

_V_a_l_u_e:

     A list of Accession number.

_A_u_t_h_o_r(_s):

     Ting-Yuan Liu

_R_e_f_e_r_e_n_c_e_s:

     <URL: http://www.sanger.ac.uk/Software/Pfam/> and <URL:
     ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt>

_E_x_a_m_p_l_e_s:

     ## Not run: 
         MIM2AC <- pfamMIM2AC()
         head(MIM2AC)
         pfamMIM2AC(mim=sample(names(MIM2AC), 3))
     ## End(Not run)

