LMGene                  LMGene main function
Smpd                    Sample array data for LMGene package
Smpd0                   Sample array data for LMGene
arrplot1                Function to calculate relative mean squares
arrplotd                Function for plotting a smoothed histogram
arrplote                Function for plotting a cumulative frequency
                        distribution
beams                   Beam search rountine for finding the optimal
                        parameters
dplot                   Plotting smoothed histogram
dplote                  Plotting cumulative frequency distribution
genediff                Raw p-value calculation function
glog                    Generalized log transformation function
jggrad2                 Generating Jacobian-corrected data
jglog                   Glog
lnorm                   Lowess normalization function
mlm2lm                  Linear Model converting function
msa                     Relative mean square calculation function
msecalc                 MSE calculation function
neweS                   Coercing to exprSet function
norm                    Additive normalization function
pvadjust                P-value adjusting function
rgplot                  Plotting density function
rowaov                  Gene by gene anova functioin
rowlist                 Gene name listing function
tranest                 Glog transformation parameter estimation
                        function
tranest2                Glog transformation parameter estimation
                        function 2
vlist                   Sample experimental data for LMGene package
