Entry: LMGene
Aliases: LMGene
Keywords: models
Description: LMGene main function
URL: ../../../library/LMGene/html/LMGene.html

Entry: Smpd
Aliases: Smpd
Keywords: datasets
Description: Sample array data for LMGene package
URL: ../../../library/LMGene/html/Smpd.html

Entry: Smpd0
Aliases: Smpd0
Keywords: datasets
Description: Sample array data for LMGene
URL: ../../../library/LMGene/html/Smpd0.html

Entry: arrplot1
Aliases: arrplot1
Keywords: dplot
Description: Function to calculate relative mean squares
URL: ../../../library/LMGene/html/arrplot1.html

Entry: arrplotd
Aliases: arrplotd
Keywords: hplot
Description: Function for plotting a smoothed histogram
URL: ../../../library/LMGene/html/arrplotd.html

Entry: arrplote
Aliases: arrplote
Keywords: hplot
Description: Function for plotting a cumulative frequency distribution
URL: ../../../library/LMGene/html/arrplote.html

Entry: beams
Aliases: beams
Keywords: optimize
Description: Beam search rountine for finding the optimal parameters
URL: ../../../library/LMGene/html/beams.html

Entry: dplot
Aliases: dplot
Keywords: hplot
Description: Plotting smoothed histogram
URL: ../../../library/LMGene/html/dplot.html

Entry: dplote
Aliases: dplote
Keywords: hplot
Description: Plotting cumulative frequency distribution
URL: ../../../library/LMGene/html/dplote.html

Entry: genediff
Aliases: genediff
Keywords: models
Description: Raw p-value calculation function
URL: ../../../library/LMGene/html/genediff.html

Entry: glog
Aliases: glog
Keywords: math
Description: Generalized log transformation function
URL: ../../../library/LMGene/html/glog.html

Entry: jggrad2
Aliases: jggrad2
Keywords: math
Description: Generating Jacobian-corrected data
URL: ../../../library/LMGene/html/jggrad2.html

Entry: jglog
Aliases: jglog
Keywords: math
Description: Glog
URL: ../../../library/LMGene/html/jglog.html

Entry: lnorm
Aliases: lnorm
Keywords: math
Description: Lowess normalization function
URL: ../../../library/LMGene/html/lnorm.html

Entry: mlm2lm
Aliases: mlm2lm
Keywords: models
Description: Linear Model converting function
URL: ../../../library/LMGene/html/mlm2lm.html

Entry: msa
Aliases: msa
Keywords: math
Description: Relative mean square calculation function
URL: ../../../library/LMGene/html/msa.html

Entry: msecalc
Aliases: msecalc
Keywords: math
Description: MSE calculation function
URL: ../../../library/LMGene/html/msecalc.html

Entry: neweS
Aliases: neweS
Keywords: manip
Description: Coercing to exprSet function
URL: ../../../library/LMGene/html/neweS.html

Entry: norm
Aliases: norm
Keywords: math
Description: Additive normalization function
URL: ../../../library/LMGene/html/norm.html

Entry: pvadjust
Aliases: pvadjust
Keywords: models
Description: P-value adjusting function
URL: ../../../library/LMGene/html/pvadjust.html

Entry: rgplot
Aliases: rgplot
Keywords: hplot
Description: Plotting density function
URL: ../../../library/LMGene/html/rgplot.html

Entry: rowaov
Aliases: rowaov
Keywords: models
Description: Gene by gene anova functioin
URL: ../../../library/LMGene/html/rowaov.html

Entry: rowlist
Aliases: rowlist
Keywords: manip
Description: Gene name listing function
URL: ../../../library/LMGene/html/rowlist.html

Entry: tranest
Aliases: tranest
Keywords: math
Description: Glog transformation parameter estimation function
URL: ../../../library/LMGene/html/tranest.html

Entry: tranest2
Aliases: tranest2
Keywords: math
Description: Glog transformation parameter estimation function 2
URL: ../../../library/LMGene/html/tranest2.html

Entry: vlist
Aliases: vlist
Keywords: datasets
Description: Sample experimental data for LMGene package
URL: ../../../library/LMGene/html/vlist.html
