Package: alignprimer
Version: 1.0-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 387
Depends: libboost-regex1.74.0-icu67, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), zlib1g (>= 1:1.1.4)
Filename: amd64/alignprimer_1.0-1_amd64.deb
Size: 140328
MD5sum: c08874303b04dabc63bf27bd6ca87fcc
SHA1: 908b099fcba0fb99690816b9e69ee937b59e5ff1
SHA256: 9f54cb27756253b629fdac1b6736f2912852acbd147de804438693f6f737b759
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/AlignPrimer>
Description: Dynamic programming alignment of PCR primers to genomes

Package: tfreg
Version: 8.1-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 23838
Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-regex1.74.0-icu67, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgsl25 (>= 2.6), liblapack3 | liblapack.so.3, libstdc++6 (>= 11)
Filename: amd64/tfreg_8.1-1_amd64.deb
Size: 7039950
MD5sum: 0aef2a045f04d76e38cfd24b43ba1890
SHA1: a5b493cacba689fbf5537cf9cba7819790f6fec9
SHA256: 70c2a404788aaca3de9ffb2f1bc527ba25c25d017cb5e5fd0ce8180ea9931b53
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/tfreg>
Description: TfReg implements the calculation of Peyrard-Bishop style Hamiltonians to obtain some physical properties of DNA and RNA duplexes. The method uses the transfer matrix technique for the calculation of the classical partition function. Also, TfReg calculates the regression of experimental versus predicted melting temperatures using the equivalent melting index.

Package: vargibbs
Version: 5.0-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 31394
Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-regex1.74.0-icu67, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgsl25 (>= 2.6), libstdc++6 (>= 11)
Filename: amd64/vargibbs_5.0-1_amd64.deb
Size: 7565670
MD5sum: 6d4f5030df31c7f0fd83ba6e71adb48f
SHA1: 7dcd50bb346b10db69818ee8230f9f07ef508057
SHA256: 4ece200fe086851b516c908ea03430c49b89fd7f0b7b5be0e6ceb9855a76af85
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/vargibbs>
Description: Minimization method for calculating DNA nearest-neighbour thermodynamic parameters