  19   390  GC

1.human
AAGGTCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGAAT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGATGTGT TTGGCCAAAT GGGAGAGTGG TTACAACACA     120
CGAGCTACAA ACTACAATGC TGGAGACAGA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCGCTACT GGTGTAATGA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATTTATCC     240
TGCAGTGCTT TGCTGCAAGA TAACATCGCT GATGCTGTAG CTTGTGCAAA GAGGGTTGTC     300
CGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCGTTGTCA AAACAGAGAT     360
GTCCGTCAGT ATGTTCAAGG TTGTGGAGTG                                      390

2.chimp_bonobo_gorilla
AAGGTCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGAAT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGATGTGT TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
CGAGCTACAA ACTACAATGC TGGAGACAGA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCGCTACT GGTGTAATGA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATTTATCC     240
TGCAGTGCTT TGCTGCAAGA TAACATCGCT GATGCTGTAG CTTGTGCAAA GAGGGTTGTC     300
CGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCGTTGTCA AAACAGAGAT     360
GTCCGTCAGT ATGTTCAAGG TTGTGGAGTA                                      390

3.orangutan_Ppy
AAGGTCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGAAT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGATGTGT TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
CGAGCTACAA ACTACAATCC TGGAGACAGA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCGCTACT GGTGTAATGA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATTTATCC     240
TGCAGTGCTT TGCTGCAAGA TAACATCGCT GATGCTGTAG CTTGTGCAAA GAGGGTTGTC     300
CGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCGTTGTCA AAACAGAGAT     360
GTCCGTCAGT ATGTTCAAGG TTGTGGAGTA                                      390

4.gibbon_Ggo
AAGGTCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGAAT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGATGTGT TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
CGAGCTACAA ACTACAATCC TGGAGACAGA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCGCTACT GGTGTAATGA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATTTATCC     240
TGCAATGCTT TGCTGCAAGA TAACATCGCC GATGCTGTAG CTTGTGCAAA GAGGGTTGTC     300
CGCGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCGTTGTCA AAACAGAGAT     360
CTCCGTCAGT ATATTCAAGG TTGTGGAGTA                                      390

5.colobus_Cgu&Can
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA AATTGGGACT GGATGGCTAC      60
AAGGGAGTCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
GACGCTACAA ACTACAATCC TGGAGATGAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCGCTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAAAA TAACATCGCT GATGCTGTAG CTTGTGCAAA GAGGGTTGTC     300
AGTGATCCAC AAGGCATTCG AGCATGGGTG GCATGGAAAA AGCACTGTCA AAACAGAGAT     360
GTCAGTCAGT ATGTTGAAGG TTGTGGAGTA                                      390

6.langur_Sen&Sve
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA AATTGGGACT GGATGGCTAC      60
AAGGGAGTCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
GAAGCTACAA ACTACAATCC TGGAGACGAA AGCACTGATT ATGGCATATT TCAGATCAAT     180
AGCCGCTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTGATGCCTG TCATATATCC     240
TGCAGTGCTT TGCTGCAAAA TAACATCGCT GATGCTGTAG CTTGTGCAAA GAGGGTTGTC     300
AGTGATCCAC AAGGCATTCG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAAAGAT     360
GTCAGTCAGT ACGTTAAAGG TTGTGGAGTA                                      390

7.langur_Tob&Tfr
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA AATTGGGACT GGATGGCTAC      60
AAGGGAGTCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
GAAGCTACAA ACTACAATCC TGGAGACGAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCGCTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTGATGCCTG TCATATATCC     240
TGCAGTGCTT TGCTGCAAAA TAACATCGCT GATGCTGTAG CTTGTGCAAA GAGGGTTGTC     300
AGTGATCCAC AAGGCATTCG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAAAGAT     360
GTCAGTCAGT ACGTTAAAGG TTGTGGAGTA                                      390

8.Douc_langur_Pne
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA AATTGGGACT GGATGGCTAC      60
AAGGGAGTCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
GAAGCTACAA ACTACAATCC TGGAGACGAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCGCTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTGATGCCTG TCATATATCC     240
TGCAGTGCTT TGCTGCAAAA CAACATCGCT GATGCTGTAG CTTGTGCAAA GAGGGTTGTC     300
AGTGATCCAC AAGGCGTTCG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAAAGAT     360
GTCAGTCAGT ACGTTAAAGG TTGTGGAGTG                                      390

9.probiscis_Nla
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA AATTGGGACT GGATGGCTAC      60
AAGGGAGTCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
GAAGCTACAA ACTACAATCC TGGAGACGAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCGCTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTGATGCCTG TCATATATCC     240
TGCAGTGCTT TGCTGCAAAA TAACATCGCT GATGCTGTAG CTTGTGCAAA GAGGGTTGTC     300
AGTGATCCAC AAGGCATTCG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAGAGAT     360
GTCAGTCAGT ACGTTAAAGG TTGTGGAGTG                                      390

10.baboon_Pcy
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGACT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGA TTATAACACA     120
CAAGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAAGA TAACATCGCT GATGCTGTAA CTTGTGCAAA GAGGGTGGTC     300
AGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAGAGAT     360
GTCAGTCAGT ATGTTCAAGG TTGTGGAGTG                                      390

11.mangabey_Cat
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGACT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGA TTATAACACA     120
CAAGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAAGA TAACATCGCT GATGCTGTAA CTTGTGCAAA GAGGGTTGTC     300
AGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAGAGAT     360
GTCAGTCAGT ATGTTCAAGG TTGTGGAGTG                                      390

12.rhesus_Mmu
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGACT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTAA TTATAACACA     120
CAAGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAAGA TAACATCGCT GATGCTGTAA CTTGTGCAAA GAGGGTTGTC     300
AGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAGAGAT     360
GTCAGTCAGT ATGTTCAAGG TTGTGGAGTG                                      390

13.Allen_Ani
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGACT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGA TTATAACACA     120
CAAGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCGTATATCC     240
TGCAATGCTT TGCTGCAAGA TAACATCGCT GATGCTGTAA CTTGTGCAAA GAGGGTTGTC     300
AGAGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAGAGAT     360
GTCAGTCAGT ATGTTCAAGG TTGTGGAGTG                                      390

14.talapoin_Mta
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGACT GGATGGCTAC      60
AGGGGAATTA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGA TTATAACACA     120
CAAGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAAGA TAACATCGCT GATGCTGTAA CTTGTGCAAA GAGGGTTGTC     300
CGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCACTGTCA CAACAGAGAT     360
GTCAGTCAGT ATGTTCAAGG TTGTGGAGTG                                      390

15.patas_Epa
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGACT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGGTGTGT TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
CAAGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAGGA TAACATTGCT GATGCTGTAA CTTGTGCAAA GAGGGTTGTC     300
CGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAGAGAT     360
GTCAGTCAGT ATGTTCAAGG TTGTGGAGTG                                      390

16.vervet_Cae
AAGATCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GATTGGGACT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGGTGTGC TTGGCCAAAT GGGAGAGTGG TTATAACACA     120
CAAGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTACT GGTGTAATAA TGGCAAAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAAGA TAACATCGCT GATGCTGTAA CTTGTGCAAA GAGGGTTGTC     300
CGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAGAA ATCACTGTCA AAACAGAGAT     360
GTCAGTCAGT ATGTTCAAGG TTGTGGAGTG                                      390

17.squirrel_m
AAGGTCTTCG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GGCTTGGAAT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGATGTGT TTGGCCAAAT GGGAGAGTGA CTATAACACA     120
CGTGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTATT GGTGTAATAA TGGCAGAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAAGA TGACATCACT CAAGCTGTGG CCTGTGCAAA GAGGGTTGTC     300
CGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAAAG CTCATTGTCA AAACAGAGAT     360
GTCAGTCAGT ATGTTCAAGG TTGTGGAGTA                                      390

18.tamarin_Soe
AAGGTCTTCG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GACTTGGATT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGATGTGT TTGGCCAAAT GGGAGAGTGA TTATAACACA     120
CGTGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTATT GGTGTAATAA CGGCAGAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAAGA TGACATCACT GAAGCTGTGG CCTGTGCAAA GAGGGTTGTC     300
CGTGATCCAC AAGGCATTAG AGCATGGGTG GCATGGAAAG CTCATTGTCA AAACAGAGAT     360
GTCAGTCAGT ATATTCAAGG TTGTGGAGTA                                      390

19.Marmoset_Cja
AAGGTCTTTG AAAGGTGTGA GTTGGCCAGA ACTCTGAAAA GGTTTGGACT GGATGGCTAC      60
AGGGGAATCA GCCTAGCAAA CTGGATGTGT TTGGCCAAAT GGGAGAGTGA TTATAACACA     120
CGTGCTACAA ACTACAATCC TGGAGACCAA AGCACTGATT ATGGGATATT TCAGATCAAT     180
AGCCACTATT GGTGTAACAA TGGCAGAACC CCAGGAGCAG TTAATGCCTG TCATATATCC     240
TGCAATGCTT TGCTGCAAGA TGACATCACT GAAGCTGTGG CCTGTGCAAA GAGGGTTGTC     300
CGCGATCCAC AAGGCATTAG GGCATGGGTG GCATGGAAAG CTCATTGTCA AAACAGAGAT     360
GTCAGTCAGT ATGTTCAAGG TTGTGGAGTA                                      390



Messier W. and C.-B. Stewart.  1997.  Episodic adaptive evolution of
primate lysozymes.  Nature 385:151-154.

Table 2 (MS Document) from Nature web pages.
Common names and other information in Table 1.

Table 2 Nucleotide sequences of primate lysozymes.  The amino acid
sequence of the mature human lysozyme protein is shown on the top line
in the three-letter code; its DNA sequence is shown below, divided
into codons.  Sequences of the other primate lysozymes (species
binomial abbreviations are in Table 1) are shown only where they
differ from the human sequence; dots indicate identities to the human
sequence.  Those nucleotides in capital letters are nonsynonymous
differences, and those in small letters are synonymous differences,
when compared to the human sequence.  For each species, we sequenced
the entire coding region, although only the mature region is shown.
The mature coding region of chimpanzee (Ptr), bonobo (Ppa) and the
least derived gorilla allele (Ggo) were identical to the nucleotide,
so are listed on one line; the same is true for other lines with more
than one species abbreviation.  Only in gorilla and orangutan did we
find allelic differences (G. Maston and C.-B. S., in preparation); the
less derived alleles are shown here.


(1,2,(3,(4,(((5,(((6,7),8),9)),((16,15),((12,((10,13),11)),14))),((17,18),19)))));
